Protein Family : 2.7.7.49 - RNA-directed DNA polymerase / Revertase 124251740

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  8

8 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Thhalv10000595m.g (1 of 1) PTHR11439//PTHR11439:SF188 - GAG-POL-RELATED RETROTRANSPOSON E. salsugineum v1.0 738   scaffold_15: 4223462-4224199
Thecc1EG024518 (1 of 2) PF00098//PF14223 - Zinc knuckle (zf-CCHC) // gag-polypeptide of LTR copia-type (UBN2) T. cacao v1.1 3494   scaffold_5: 26287681-26291174
Cagra.20508s0001 (1 of 16) 2.7.7.49 - RNA-directed DNA polymerase / Revertase C. grandiflora v1.1 840   Scaffold20508: 246-1085
Brara.F01953 (1 of 10) 2.7.7.49 - RNA-directed DNA polymerase / Revertase B. rapa FPsc v1.3 2118   A06: 14639368-14641485
SapurV1A.0387s0090 (1 of 36) 2.7.7.49 - RNA-directed DNA polymerase / Revertase S. purpurea v1.0 843   chr11: 2567561-2568403
SapurV1A.0312s0180 (1 of 11) PTHR11439//PTHR11439:SF188 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED S. purpurea v1.0 918   chr17: 2809688-2810605
SapurV1A.0246s0190 (1 of 36) 2.7.7.49 - RNA-directed DNA polymerase / Revertase S. purpurea v1.0 801   chr18: 7449528-7450328
Potri.006G182700 (1 of 14) 2.7.7.49 - RNA-directed DNA polymerase / Revertase P. trichocarpa v3.1 1176   Chr06: 19681726-19682901

8 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thecc1EG024518t1 T. cacao v1.1 124251740 2.7.7.49 - RNA-directed DNA polymerase / Revertase 1 5268 Malvidae
Cagra.20508s0001.1.p C. grandiflora v1.1 124251740 2.7.7.49 - RNA-directed DNA polymerase / Revertase 1 5268 Malvidae
SapurV1A.0312s0180.1.p S. purpurea v1.0 124251740 2.7.7.49 - RNA-directed DNA polymerase / Revertase 3 5268 Malvidae
Thhalv10000595m E. salsugineum v1.0 124251740 2.7.7.49 - RNA-directed DNA polymerase / Revertase 1 5268 Malvidae
Brara.F01953.1.p B. rapa FPsc v1.3 124251740 2.7.7.49 - RNA-directed DNA polymerase / Revertase 1 5268 Malvidae
SapurV1A.0387s0090.1.p S. purpurea v1.0 124251740 2.7.7.49 - RNA-directed DNA polymerase / Revertase 3 5268 Malvidae
SapurV1A.0246s0190.1.p S. purpurea v1.0 124251740 2.7.7.49 - RNA-directed DNA polymerase / Revertase 3 5268 Malvidae
Potri.006G182700.1.p P. trichocarpa v3.1 124251740 2.7.7.49 - RNA-directed DNA polymerase / Revertase 1 5268 Malvidae