Protein Family : E3 ubiquitin ligase involved in syntaxin degradation 122189603

Method ID:  5267 Method Name:  Panicoideae
Sequence Alignment:  View MSA Member Count:  9

9 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Seita.1G220900 (1 of 1) PTHR18937//PTHR18937:SF272 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER S. italica v2.2 7768   scaffold_1: 29968709-29976476
Zm00008a022238 (1 of 1) PTHR18937//PTHR18937:SF272 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED Z. mays PH207 v1.1 7406   chr05: 178401729-178409134
Pavir.1NG331900 (1 of 2) PTHR18937//PTHR18937:SF272 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED P. virgatum v4.1 7863   Chr01N: 72631249-72639111
Sobic.004G204100 (1 of 1) PTHR18937//PTHR18937:SF272 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED S. bicolor v3.1.1 7697   Chr04: 55575024-55582720
Zm00001d017113 (1 of 1) PTHR18937//PTHR18937:SF272 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED Z. mays RefGen_V4 7838   5: 185778368-185786205
Pahal.1G293800 (1 of 1) PTHR18937//PTHR18937:SF272 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED P. hallii v3.1 9120   Chr01: 48811406-48820525
PhHAL.1G287400 (1 of 1) PTHR18937//PTHR18937:SF272 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED P. hallii HAL v2.1 8865   Chr01: 47859950-47868814
Misin07G393000 (1 of 2) PTHR18937//PTHR18937:SF272 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED M. sinensis v7.1 7799   Chr07: 123082493-123090291
Sevir.1G224800 (1 of 1) PTHR18937//PTHR18937:SF272 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED S. viridis v2.1 8959   Chr_01: 29802268-29811226

9 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Seita.1G220900.1.p S. italica v2.2 122189603 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Zm00008a022238_P01 Z. mays PH207 v1.1 122189603 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Zm00001d017113_P002 Z. mays RefGen_V4 122189603 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Misin07G393000.1.p M. sinensis v7.1 122189603 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Pavir.1NG331900.1.p P. virgatum v4.1 122189603 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Sobic.004G204100.1.p S. bicolor v3.1.1 122189603 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Pahal.1G293800.1.p P. hallii v3.1 122189603 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
PhHAL.1G287400.1.p P. hallii HAL v2.1 122189603 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Sevir.1G224800.1.p S. viridis v2.1 122189603 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae