Protein Family : Plant self-incompatibility protein S1 family 124350972

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  17

17 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g045924m.g (1 of 15) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. sinensis v1.1 345   scaffold00347: 52109-52453
orange1.1g038489m.g (1 of 15) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. sinensis v1.1 393   scaffold00541: 47904-48296
AT3G16970 (1 of 20) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. thaliana TAIR10 423   Chr3: 5793668-5794090
Thhalv10022192m.g (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED E. salsugineum v1.0 402   scaffold_13: 3558330-3558731
Thhalv10022389m.g (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED E. salsugineum v1.0 402   scaffold_13: 3560818-3561219
Ciclev10006461m.g (1 of 21) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. clementina v1.0 372   scaffold_9: 8900374-8900745
Ciclev10007065m.g (1 of 21) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. clementina v1.0 438   scaffold_9: 8665161-8665598
Gorai.009G340100 (1 of 6) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED G. raimondii v2.1 741   Chr09: 39128410-39129150
Gorai.009G340000 (1 of 6) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED G. raimondii v2.1 428   Chr09: 39080560-39080987
Gorai.009G339900 (1 of 6) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED G. raimondii v2.1 627   Chr09: 39000307-39000933
Gorai.009G340300 (1 of 6) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED G. raimondii v2.1 537   Chr09: 39210736-39211272
Araha.65480s0001 (1 of 21) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. halleri v1.1 427   Scaffold65480: 114-540
Cagra.4396s0004 (1 of 22) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. grandiflora v1.1 381   Scaffold4396: 16836-17216
Brara.A03030 (1 of 43) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED B. rapa FPsc v1.3 399   A01: 25743767-25744165
Bostr.19424s0971 (1 of 21) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED B. stricta v1.2 411   Scaffold19424: 6882503-6882913
AL3G29950 (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. lyrata v2.1 432   scaffold_3: 7247416-7247847
Carub.0003s1672 (1 of 24) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. rubella v1.1 423   scaffold_3: 5922113-5922535

17 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g045924m C. sinensis v1.1 124350972 Plant self-incompatibility protein S1 family 2 5266 SBM
Thhalv10022389m E. salsugineum v1.0 124350972 Plant self-incompatibility protein S1 family 2 5266 SBM
Ciclev10006461m C. clementina v1.0 124350972 Plant self-incompatibility protein S1 family 2 5266 SBM
Araha.65480s0001.1.p A. halleri v1.1 124350972 Plant self-incompatibility protein S1 family 1 5266 SBM
Brara.A03030.1.p B. rapa FPsc v1.3 124350972 Plant self-incompatibility protein S1 family 1 5266 SBM
orange1.1g038489m C. sinensis v1.1 124350972 Plant self-incompatibility protein S1 family 2 5266 SBM
AT3G16970.1 A. thaliana TAIR10 124350972 Plant self-incompatibility protein S1 family 1 5266 SBM
Thhalv10022192m E. salsugineum v1.0 124350972 Plant self-incompatibility protein S1 family 2 5266 SBM
Ciclev10007065m C. clementina v1.0 124350972 Plant self-incompatibility protein S1 family 2 5266 SBM
Gorai.009G339900.1 G. raimondii v2.1 124350972 Plant self-incompatibility protein S1 family 4 5266 SBM
Gorai.009G340300.1 G. raimondii v2.1 124350972 Plant self-incompatibility protein S1 family 4 5266 SBM
Gorai.009G340100.1 G. raimondii v2.1 124350972 Plant self-incompatibility protein S1 family 4 5266 SBM
Gorai.009G340000.1 G. raimondii v2.1 124350972 Plant self-incompatibility protein S1 family 4 5266 SBM
Cagra.4396s0004.1.p C. grandiflora v1.1 124350972 Plant self-incompatibility protein S1 family 1 5266 SBM
Bostr.19424s0971.1.p B. stricta v1.2 124350972 Plant self-incompatibility protein S1 family 1 5266 SBM
AL3G29950.t1 A. lyrata v2.1 124350972 Plant self-incompatibility protein S1 family 1 5266 SBM
Carub.0003s1672.1.p C. rubella v1.1 124350972 Plant self-incompatibility protein S1 family 1 5266 SBM