Gene : Cagra.4396s0004 C. grandiflora v1.1
Defline:  (1 of 22) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED Genomic Order:  4
Name:  ? Cagra.4396s0004 Secondary Identifier:  ? PAC:28918042
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4396s0004 0.5kb upstream 0.5kb upstream 881 true Scaffold4396: 16836-17716 Capsella grandiflora
Cagra.4396s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4396: 17217-17716 Capsella grandiflora
Cagra.4396s0004 0.5kb downstream 0.5kb downstream 881 true Scaffold4396: 16336-17216 Capsella grandiflora
Cagra.4396s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4396: 16336-16835 Capsella grandiflora
Cagra.4396s0004 1.0kb upstream 1.0kb upstream 1381 true Scaffold4396: 16836-18216 Capsella grandiflora
Cagra.4396s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4396: 17217-18216 Capsella grandiflora
Cagra.4396s0004 1.0kb downstream 1.0kb downstream 1381 true Scaffold4396: 15836-17216 Capsella grandiflora
Cagra.4396s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4396: 15836-16835 Capsella grandiflora
Cagra.4396s0004 2.0kb upstream 2.0kb upstream 2381 true Scaffold4396: 16836-19216 Capsella grandiflora
Cagra.4396s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4396: 17217-19216 Capsella grandiflora
Cagra.4396s0004 2.0kb downstream 2.0kb downstream 2381 true Scaffold4396: 14836-17216 Capsella grandiflora
Cagra.4396s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4396: 14836-16835 Capsella grandiflora
Cagra.4396s0004 5.0kb upstream 5.0kb upstream 5381 true Scaffold4396: 16836-22216 Capsella grandiflora
Cagra.4396s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4396: 17217-22216 Capsella grandiflora
Cagra.4396s0004 5.0kb downstream 5.0kb downstream 5381 true Scaffold4396: 11836-17216 Capsella grandiflora
Cagra.4396s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4396: 11836-16835 Capsella grandiflora
Cagra.4396s0004 10.0kb upstream 10.0kb upstream 10381 true Scaffold4396: 16836-27216 Capsella grandiflora
Cagra.4396s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4396: 17217-27216 Capsella grandiflora
Cagra.4396s0004 10.0kb downstream 10.0kb downstream 10381 true Scaffold4396: 6836-17216 Capsella grandiflora
Cagra.4396s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold4396: 6836-16835 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375414 5261 Brassicaceae View MSA
123839040 5264 Brassicales-Malvales View MSA
124350972 5266 SBM View MSA
124252720 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain