Protein Family : U2 snRNP auxilliary factor, large subunit, splicing factor 123840323

Method ID:  5264 Method Name:  Brassicales-Malvales
Sequence Alignment:  View MSA Member Count:  21

21 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
AT4G36690 (1 of 1) PTHR23139//PTHR23139:SF61//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED A. thaliana TAIR10 ATU2AF65A 3815   Chr4: 17293947-17297761
AT1G60900 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED A. thaliana TAIR10 4114   Chr1: 22423909-22428022
Thhalv10024786m.g (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN E. salsugineum v1.0 3645   scaffold_1: 1426711-1430355
Thhalv10023361m.g (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN E. salsugineum v1.0 4265   scaffold_8: 3611227-3615491
Gorai.012G005600 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN G. raimondii v2.1 4875   Chr12: 668982-673856
Gorai.008G068800 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN G. raimondii v2.1 4525   Chr08: 11330717-11335241
Gorai.009G311200 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN G. raimondii v2.1 5234   Chr09: 28942848-28948081
Thecc1EG000427 (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED T. cacao v1.1 4980   scaffold_1: 1740504-1745483
Thecc1EG043260 (1 of 1) PTHR23139//PTHR23139:SF61//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED T. cacao v1.1 4963   scaffold_10r: 4830382-4835344
Araha.11209s0004 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN A. halleri v1.1 4100   Scaffold11209: 22860-26959
Araha.18319s0001 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN A. halleri v1.1 3669   Scaffold18319: 14-3682
Cagra.1216s0006 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN C. grandiflora v1.1 4501   Scaffold1216: 26573-31073
Cagra.1695s0032 (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN C. grandiflora v1.1 3608   Scaffold1695: 128436-132043
Brara.A02501 (1 of 1) PF06495 - Fruit fly transformer protein (Transformer) B. rapa FPsc v1.3 3695   A01: 20322704-20326398
Brara.H01687 (1 of 4) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN B. rapa FPsc v1.3 3287   A08: 16508335-16511621
Bostr.7867s1525 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN B. stricta v1.2 3896   Scaffold7867: 7699561-7703456
Bostr.10040s0121 (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN B. stricta v1.2 4302   Scaffold10040: 1071965-1076266
AL2G15600 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED A. lyrata v2.1 4142   scaffold_2: 2847799-2851940
AL7G14320 (1 of 3) K12837 - splicing factor U2AF 65 kDa subunit (U2AF2) A. lyrata v2.1 3754   scaffold_7: 1725010-1728763
Carub.0002s0439 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED C. rubella v1.1 4239   scaffold_2: 1834601-1838839
Carub.0007s0363 (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED C. rubella v1.1 3677   scaffold_7: 1343741-1347417

21 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Gorai.008G068800.1 G. raimondii v2.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5264 Brassicales-Malvales
Gorai.012G005600.1 G. raimondii v2.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5264 Brassicales-Malvales
Thecc1EG000427t2 T. cacao v1.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Araha.11209s0004.1.p A. halleri v1.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Brara.H01687.1.p B. rapa FPsc v1.3 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Bostr.7867s1525.1.p B. stricta v1.2 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
AL7G14320.t1 A. lyrata v2.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
AL2G15600.t4 A. lyrata v2.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
AT1G60900.1 A. thaliana TAIR10 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
AT4G36690.1 A. thaliana TAIR10 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Thhalv10023361m E. salsugineum v1.0 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Thhalv10024786m E. salsugineum v1.0 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Gorai.009G311200.1 G. raimondii v2.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5264 Brassicales-Malvales
Thecc1EG043260t4 T. cacao v1.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Araha.18319s0001.1.p A. halleri v1.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Cagra.1216s0006.1.p C. grandiflora v1.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Cagra.1695s0032.1.p C. grandiflora v1.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Brara.A02501.1.p B. rapa FPsc v1.3 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Bostr.10040s0121.1.p B. stricta v1.2 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Carub.0007s0363.1.p C. rubella v1.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales
Carub.0002s0439.1.p C. rubella v1.1 123840323 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5264 Brassicales-Malvales