Gene : Cagra.1695s0032 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN Genomic Order:  32
Name:  ? Cagra.1695s0032 Secondary Identifier:  ? PAC:28908500
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1695s0032 0.5kb upstream 0.5kb upstream 4108 true Scaffold1695: 128436-132543 Capsella grandiflora
Cagra.1695s0032 0.5kb upstream 0.5kb upstream 500 false Scaffold1695: 132044-132543 Capsella grandiflora
Cagra.1695s0032 0.5kb downstream 0.5kb downstream 4108 true Scaffold1695: 127936-132043 Capsella grandiflora
Cagra.1695s0032 0.5kb downstream 0.5kb downstream 500 false Scaffold1695: 127936-128435 Capsella grandiflora
Cagra.1695s0032 1.0kb upstream 1.0kb upstream 4608 true Scaffold1695: 128436-133043 Capsella grandiflora
Cagra.1695s0032 1.0kb upstream 1.0kb upstream 1000 false Scaffold1695: 132044-133043 Capsella grandiflora
Cagra.1695s0032 1.0kb downstream 1.0kb downstream 4608 true Scaffold1695: 127436-132043 Capsella grandiflora
Cagra.1695s0032 1.0kb downstream 1.0kb downstream 1000 false Scaffold1695: 127436-128435 Capsella grandiflora
Cagra.1695s0032 2.0kb upstream 2.0kb upstream 5608 true Scaffold1695: 128436-134043 Capsella grandiflora
Cagra.1695s0032 2.0kb upstream 2.0kb upstream 2000 false Scaffold1695: 132044-134043 Capsella grandiflora
Cagra.1695s0032 2.0kb downstream 2.0kb downstream 5608 true Scaffold1695: 126436-132043 Capsella grandiflora
Cagra.1695s0032 2.0kb downstream 2.0kb downstream 2000 false Scaffold1695: 126436-128435 Capsella grandiflora
Cagra.1695s0032 5.0kb upstream 5.0kb upstream 8608 true Scaffold1695: 128436-137043 Capsella grandiflora
Cagra.1695s0032 5.0kb upstream 5.0kb upstream 5000 false Scaffold1695: 132044-137043 Capsella grandiflora
Cagra.1695s0032 5.0kb downstream 5.0kb downstream 8608 true Scaffold1695: 123436-132043 Capsella grandiflora
Cagra.1695s0032 5.0kb downstream 5.0kb downstream 5000 false Scaffold1695: 123436-128435 Capsella grandiflora
Cagra.1695s0032 10.0kb upstream 10.0kb upstream 10898 true Scaffold1695: 128436-139333 Capsella grandiflora
Cagra.1695s0032 10.0kb upstream 10.0kb upstream 7290 false Scaffold1695: 132044-139333 Capsella grandiflora
Cagra.1695s0032 10.0kb downstream 10.0kb downstream 13608 true Scaffold1695: 118436-132043 Capsella grandiflora
Cagra.1695s0032 10.0kb downstream 10.0kb downstream 10000 false Scaffold1695: 118436-128435 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371180 5261 Brassicaceae View MSA
123840323 5264 Brassicales-Malvales View MSA
124343830 5266 SBM View MSA
124250536 5268 Malvidae View MSA
124065257 5270 Rosid View MSA
123749949 5271 Pentapetalae View MSA
122795253 5272 Eudicot View MSA
122050030 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349493 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain