Protein Family : 123823905

Method ID:  5264 Method Name:  Brassicales-Malvales
Sequence Alignment:  View MSA Member Count:  5

5 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Thecc1EG003333 (1 of 14) PF07727//PF14223 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // gag-polypeptide of LTR copia-type (UBN2) T. cacao v1.1 5424   scaffold_1: 22004585-22010008
Thecc1EG022223 (1 of 10) PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) T. cacao v1.1 3926   scaffold_5: 3223186-3227111
Thecc1EG031690 (1 of 6) PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) T. cacao v1.1 2779   scaffold_7: 6272655-6275433
Thecc1EG040572 (1 of 2) PF07727//PF13961//PF14223 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // Domain of unknown function (DUF4219) (DUF4219) // gag-polypeptide of LTR copia-type (UBN2) T. cacao v1.1 7189   scaffold_9: 31645302-31652490
Thecc1EG040853 (1 of 2) PF00665//PF07727//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // gag-polypeptide of LTR copia-type (UBN2) T. cacao v1.1 6264   scaffold_9: 33950830-33957093

5 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thecc1EG022223t1 T. cacao v1.1 123823905   5 5264 Brassicales-Malvales
Thecc1EG040853t1 T. cacao v1.1 123823905   5 5264 Brassicales-Malvales
Thecc1EG003333t1 T. cacao v1.1 123823905   5 5264 Brassicales-Malvales
Thecc1EG031690t1 T. cacao v1.1 123823905   5 5264 Brassicales-Malvales
Thecc1EG040572t1 T. cacao v1.1 123823905   5 5264 Brassicales-Malvales