Protein Family : PF14223 - gag-polypeptide of LTR copia-type (UBN2) 122461661

Method ID:  5262 Method Name:  Malpighiales
Sequence Alignment:  View MSA Member Count:  15

15 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
SapurV1A.1800s0030 (1 of 1) PTHR11439//PTHR11439:SF167 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED S. purpurea v1.0 399   Scaffold1800: 20484-20882
Manes.08G064900 (1 of 7) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON M. esculenta v6.1 756   Chromosome08: 8542464-8543219
Manes.07G070700 (1 of 7) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON M. esculenta v6.1 628   Chromosome07: 12032427-12033054
Manes.06G177700 (1 of 1) PTHR11439//PTHR11439:SF176 - GAG-POL-RELATED RETROTRANSPOSON M. esculenta v6.1 300   Chromosome06: 27607565-27607864
Manes.04G052300 (1 of 30) PF14223 - gag-polypeptide of LTR copia-type (UBN2) M. esculenta v6.1 551   Chromosome04: 8826762-8827312
Manes.04G065400 (1 of 30) PF14223 - gag-polypeptide of LTR copia-type (UBN2) M. esculenta v6.1 556   Chromosome04: 18541190-18541745
Manes.03G071300 (1 of 25) PTHR11439 - GAG-POL-RELATED RETROTRANSPOSON M. esculenta v6.1 2667   Chromosome03: 9049643-9052309
Manes.02G212200 (1 of 42) PF00098 - Zinc knuckle (zf-CCHC) M. esculenta v6.1 582   Chromosome02: 23276463-23277044
Manes.09G090800 (1 of 7) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON M. esculenta v6.1 387   Chromosome09: 19477567-19477953
Manes.10G087500 (1 of 30) PF14223 - gag-polypeptide of LTR copia-type (UBN2) M. esculenta v6.1 366   Chromosome10: 17982126-17982491
Manes.10G055700 (1 of 30) PF14223 - gag-polypeptide of LTR copia-type (UBN2) M. esculenta v6.1 579   Chromosome10: 6368638-6369216
Manes.12G095600 (1 of 25) PTHR11439 - GAG-POL-RELATED RETROTRANSPOSON M. esculenta v6.1 387   Chromosome12: 16557550-16557936
Manes.16G049400 (1 of 30) PF14223 - gag-polypeptide of LTR copia-type (UBN2) M. esculenta v6.1 823   Chromosome16: 9176544-9177366
Manes.18G144700 (1 of 30) PF14223 - gag-polypeptide of LTR copia-type (UBN2) M. esculenta v6.1 545   Chromosome18: 23339475-23340019
Manes.S002700 (1 of 7) PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON M. esculenta v6.1 624   Scaffold00334: 103401-104024

15 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Manes.04G065400.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
Manes.04G052300.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
Manes.10G087500.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
SapurV1A.1800s0030.1.p S. purpurea v1.0 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 1 5262 Malpighiales
Manes.08G064900.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
Manes.06G177700.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
Manes.16G049400.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
Manes.07G070700.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
Manes.02G212200.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
Manes.12G095600.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
Manes.S002700.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
Manes.09G090800.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
Manes.03G071300.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
Manes.18G144700.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales
Manes.10G055700.1.p M. esculenta v6.1 122461661 PF14223 - gag-polypeptide of LTR copia-type (UBN2) 14 5262 Malpighiales