Gene : SapurV1A.1800s0030 S. purpurea v1.0
Defline:  (1 of 1) PTHR11439//PTHR11439:SF167 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED Genomic Order:  3
Name:  ? SapurV1A.1800s0030 Secondary Identifier:  ? PAC:31450467
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1800s0030 0.5kb upstream 0.5kb upstream 899 true Scaffold1800: 19984-20882 Salix purpurea
SapurV1A.1800s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1800: 19984-20483 Salix purpurea
SapurV1A.1800s0030 0.5kb downstream 0.5kb downstream 899 true Scaffold1800: 20484-21382 Salix purpurea
SapurV1A.1800s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold1800: 20883-21382 Salix purpurea
SapurV1A.1800s0030 1.0kb upstream 1.0kb upstream 1399 true Scaffold1800: 19484-20882 Salix purpurea
SapurV1A.1800s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1800: 19484-20483 Salix purpurea
SapurV1A.1800s0030 1.0kb downstream 1.0kb downstream 1399 true Scaffold1800: 20484-21882 Salix purpurea
SapurV1A.1800s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold1800: 20883-21882 Salix purpurea
SapurV1A.1800s0030 2.0kb upstream 2.0kb upstream 2399 true Scaffold1800: 18484-20882 Salix purpurea
SapurV1A.1800s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1800: 18484-20483 Salix purpurea
SapurV1A.1800s0030 2.0kb downstream 2.0kb downstream 2399 true Scaffold1800: 20484-22882 Salix purpurea
SapurV1A.1800s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold1800: 20883-22882 Salix purpurea
SapurV1A.1800s0030 5.0kb upstream 5.0kb upstream 5399 true Scaffold1800: 15484-20882 Salix purpurea
SapurV1A.1800s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1800: 15484-20483 Salix purpurea
SapurV1A.1800s0030 5.0kb downstream 5.0kb downstream 5399 true Scaffold1800: 20484-25882 Salix purpurea
SapurV1A.1800s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold1800: 20883-25882 Salix purpurea
SapurV1A.1800s0030 10.0kb upstream 10.0kb upstream 10399 true Scaffold1800: 10484-20882 Salix purpurea
SapurV1A.1800s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1800: 10484-20483 Salix purpurea
SapurV1A.1800s0030 10.0kb downstream 10.0kb downstream 10399 true Scaffold1800: 20484-30882 Salix purpurea
SapurV1A.1800s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold1800: 20883-30882 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461661 5262 Malpighiales View MSA
124249328 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain