Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 122376069

Method ID:  5261 Method Name:  Brassicaceae
Sequence Alignment:  View MSA Member Count:  14

14 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
AT5G04280 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) A. thaliana TAIR10 3389   Chr5: 1192274-1195662
AT1G60650 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) A. thaliana TAIR10 2529   Chr1: 22339809-22342337
Thhalv10023624m.g (1 of 10) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) E. salsugineum v1.0 2808   scaffold_8: 3909026-3911833
Araha.0034s0005 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains A. halleri v1.1 3362   Scaffold34: 25798-29159
Araha.9271s0004 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains A. halleri v1.1 2459   Scaffold9271: 9153-11611
Cagra.9217s0008 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains C. grandiflora v1.1 3352   Scaffold9217: 30336-33687
Cagra.12428s0007 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains C. grandiflora v1.1 2409   Scaffold12428: 28689-31097
Brara.C00156 (1 of 14) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) B. rapa FPsc v1.3 3098   A03: 697430-700527
Bostr.2128s0019 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains B. stricta v1.2 3500   Scaffold2128: 102060-105559
Bostr.10040s0149 (1 of 1) KOG0107//KOG0109 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains B. stricta v1.2 2391   Scaffold10040: 1295890-1298280
AL2G15940 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) A. lyrata v2.1 2526   scaffold_2: 3003505-3006030
AL6G13910 (1 of 1) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains A. lyrata v2.1 3315   scaffold_6: 1405751-1409065
Carub.0006s0323 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) C. rubella v1.1 3345   scaffold_6: 1179140-1182484
Carub.0002s0468 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) C. rubella v1.1 2151   scaffold_2: 1938535-1940685

14 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT1G60650.1 A. thaliana TAIR10 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5261 Brassicaceae
Araha.9271s0004.1.p A. halleri v1.1 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5261 Brassicaceae
Cagra.12428s0007.1.p C. grandiflora v1.1 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5261 Brassicaceae
Brara.C00156.1.p B. rapa FPsc v1.3 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5261 Brassicaceae
Carub.0002s0468.1.p C. rubella v1.1 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5261 Brassicaceae
AT5G04280.1 A. thaliana TAIR10 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5261 Brassicaceae
Thhalv10023624m E. salsugineum v1.0 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5261 Brassicaceae
Araha.0034s0005.1.p A. halleri v1.1 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5261 Brassicaceae
Cagra.9217s0008.1.p C. grandiflora v1.1 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5261 Brassicaceae
Bostr.10040s0149.1.p B. stricta v1.2 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5261 Brassicaceae
Bostr.2128s0019.1.p B. stricta v1.2 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5261 Brassicaceae
AL2G15940.t1 A. lyrata v2.1 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5261 Brassicaceae
AL6G13910.t1 A. lyrata v2.1 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5261 Brassicaceae
Carub.0006s0323.1.p C. rubella v1.1 122376069 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5261 Brassicaceae