Protein Family : RNA helicase, ATP-dependent, SK12/DOB1 protein 122041167

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  63

63 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29609.t000017 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) R. communis v0.1 9368   29609: 142454-151821
Cucsa.120490 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) C. sativus v1.0 9690   scaffold00998: 2584084-2593773
orange1.1g006319m.g (1 of 1) PF00271//PF08148//PF13234 - Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) C. sinensis v1.1 6983   scaffold00623: 50176-57158
AT1G59760 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) A. thaliana TAIR10 5731   Chr1: 21984445-21990175
Thhalv10023236m.g (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) E. salsugineum v1.0 6480   scaffold_8: 5238310-5244789
Ciclev10027747m.g (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) C. clementina v1.0 9972   scaffold_8: 6933872-6943843
Lus10024454.g (1 of 3) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) L. usitatissimum v1.0 5784   scaffold159: 180842-186625
Lus10007442.g (1 of 1) PF00270//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) L. usitatissimum v1.0 5551   scaffold721: 99579-105129
Gorai.010G175700 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) G. raimondii v2.1 11643   Chr10: 51517626-51529268
Thecc1EG027106 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) T. cacao v1.1 11205   scaffold_6: 1456239-1467443
Migut.N00862 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. guttatus v2.0 7526   scaffold_14: 5365336-5372861
Araha.56576s0002 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) A. halleri v1.1 5335   Scaffold56576: 11775-17109
Cagra.8195s0001 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) C. grandiflora v1.1 4659   Scaffold8195: 1-4659
Glyma.08G361900 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) G. max Wm82.a2.v1 13249   Chr08: 47343753-47357001
Brara.A02352 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) B. rapa FPsc v1.3 5166   A01: 18037735-18042900
Brara.I01587 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) B. rapa FPsc v1.3 5157   A09: 10478796-10483952
Bostr.10040s0255 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) B. stricta v1.2 6377   Scaffold10040: 2283806-2290182
Medtr7g080730 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. truncatula Mt4.0v1 10624   chr7: 30721960-30732583
SapurV1A.0225s0130 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) S. purpurea v1.0 11254   chr01: 18993449-19004702
evm_27.TU.AmTr_v1.0_scaffold00066.119 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) A. trichopoda v1.0 18614   AmTr_v1.0_scaffold00066: 1697424-1716037
Traes_4AL_F1033DD8F (1 of 10) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) T. aestivum v2.2 6499   ta_iwgsc_4al_v2_7088723: 1-6499
Eucgr.G00079 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) E. grandis v2.0 9847   Chr07: 948535-958381
Prupe.6G113400 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) P. persica v2.1 7567   Pp06: 8180289-8187855
GSMUA_Achr2G17890_001 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. acuminata v1 10952   chr2: 18367514-18378465
Manes.07G030200 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. esculenta v6.1 13400   Chromosome07: 2833935-2847334
Kalax.0137s0055 (1 of 5) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) K. laxiflora v1.1 9123   scaffold_137: 452865-461987
Kalax.0729s0012 (1 of 5) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) K. laxiflora v1.1 8446   scaffold_729: 72442-80887
Seita.4G003400 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) S. italica v2.2 7676   scaffold_4: 274297-281972
Bradi1g52230 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) B. distachyon v3.1 6092   Bd1: 50759007-50765098
Aco013267 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) A. comosus v3 12000   LG24: 1108869-1120868

63 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Migut.N00862.1.p M. guttatus v2.0 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
AL2G17110.t1 A. lyrata v2.1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Tp57577_TGAC_v2_mRNA16129 T. pratense v2 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
DCAR_003282 D. carota v2.0 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Solyc01g103080.2.1 S. lycopersicum ITAG2.4 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Araha.56576s0002.1.p A. halleri v1.1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
AUR62032457-RA C. quinoa v1.0 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Cagra.8195s0001.1.p C. grandiflora v1.1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Glyma.08G361900.1.p G. max Wm82.a2.v1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Brara.A02352.1.p B. rapa FPsc v1.3 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5273 Angiosperm
Brara.I01587.1.p B. rapa FPsc v1.3 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5273 Angiosperm
Bostr.10040s0255.1.p B. stricta v1.2 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
orange1.1g006319m C. sinensis v1.1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Medtr7g080730.1 M. truncatula Mt4.0v1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
SapurV1A.0225s0130.1.p S. purpurea v1.0 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00066.119 A. trichopoda v1.0 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
AT1G59760.1 A. thaliana TAIR10 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Traes_4AL_F1033DD8F.1 T. aestivum v2.2 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Eucgr.G00079.1.p E. grandis v2.0 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Prupe.6G113400.1.p P. persica v2.1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Thhalv10023236m E. salsugineum v1.0 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
GSMUA_Achr2P17890_001 M. acuminata v1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Manes.07G030200.1.p M. esculenta v6.1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Kalax.0137s0055.1.p K. laxiflora v1.1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5273 Angiosperm
Kalax.0729s0012.1.p K. laxiflora v1.1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5273 Angiosperm
Ciclev10027747m C. clementina v1.0 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Seita.4G003400.1.p S. italica v2.2 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Bradi1g52230.1.p B. distachyon v3.1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Phvul.008G002600.1.p P. vulgaris v2.1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm
Zm00008a033951_P01 Z. mays PH207 v1.1 122041167 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5273 Angiosperm