Gene : AT1G59760 A. thaliana TAIR10
Defline:  (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) Genomic Order:  4876
Name:  ? AT1G59760 Secondary Identifier:  ? PAC:19654063
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G59760 0.5kb upstream 0.5kb upstream 6231 true Chr1: 21984445-21990675 Arabidopsis thaliana
AT1G59760 0.5kb upstream 0.5kb upstream 500 false Chr1: 21990176-21990675 Arabidopsis thaliana
AT1G59760 0.5kb downstream 0.5kb downstream 6231 true Chr1: 21983945-21990175 Arabidopsis thaliana
AT1G59760 0.5kb downstream 0.5kb downstream 500 false Chr1: 21983945-21984444 Arabidopsis thaliana
AT1G59760 1.0kb upstream 1.0kb upstream 6731 true Chr1: 21984445-21991175 Arabidopsis thaliana
AT1G59760 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21990176-21991175 Arabidopsis thaliana
AT1G59760 1.0kb downstream 1.0kb downstream 6731 true Chr1: 21983445-21990175 Arabidopsis thaliana
AT1G59760 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21983445-21984444 Arabidopsis thaliana
AT1G59760 2.0kb upstream 2.0kb upstream 7731 true Chr1: 21984445-21992175 Arabidopsis thaliana
AT1G59760 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21990176-21992175 Arabidopsis thaliana
AT1G59760 2.0kb downstream 2.0kb downstream 7731 true Chr1: 21982445-21990175 Arabidopsis thaliana
AT1G59760 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21982445-21984444 Arabidopsis thaliana
AT1G59760 5.0kb upstream 5.0kb upstream 10731 true Chr1: 21984445-21995175 Arabidopsis thaliana
AT1G59760 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21990176-21995175 Arabidopsis thaliana
AT1G59760 5.0kb downstream 5.0kb downstream 10731 true Chr1: 21979445-21990175 Arabidopsis thaliana
AT1G59760 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21979445-21984444 Arabidopsis thaliana
AT1G59760 10.0kb upstream 10.0kb upstream 15731 true Chr1: 21984445-22000175 Arabidopsis thaliana
AT1G59760 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21990176-22000175 Arabidopsis thaliana
AT1G59760 10.0kb downstream 10.0kb downstream 15731 true Chr1: 21974445-21990175 Arabidopsis thaliana
AT1G59760 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21974445-21984444 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041167 5273 Angiosperm View MSA
122372748 5261 Brassicaceae View MSA
123837863 5264 Brassicales-Malvales View MSA
124345070 5266 SBM View MSA
124240235 5268 Malvidae View MSA
124068929 5270 Rosid View MSA
123738435 5271 Pentapetalae View MSA
122793741 5272 Eudicot View MSA
121345135 5274 Embryophyte View MSA
123424912 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.716        
cufflinks 11.369        
cufflinks 6.507       Low
cufflinks 12.305       High
cufflinks 6.432       Low
cufflinks 11.674        

0 Strain