Protein Family : RNA helicase, ATP-dependent, SK12/DOB1 protein 123424912

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  72

72 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29609.t000017 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) R. communis v0.1 9368   29609: 142454-151821
Cucsa.120490 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) C. sativus v1.0 9690   scaffold00998: 2584084-2593773
orange1.1g006319m.g (1 of 1) PF00271//PF08148//PF13234 - Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) C. sinensis v1.1 6983   scaffold00623: 50176-57158
AT1G59760 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) A. thaliana TAIR10 5731   Chr1: 21984445-21990175
Thhalv10023236m.g (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) E. salsugineum v1.0 6480   scaffold_8: 5238310-5244789
Ciclev10027747m.g (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) C. clementina v1.0 9972   scaffold_8: 6933872-6943843
Lus10024454.g (1 of 3) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) L. usitatissimum v1.0 5784   scaffold159: 180842-186625
Lus10007442.g (1 of 1) PF00270//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) L. usitatissimum v1.0 5551   scaffold721: 99579-105129
Gorai.010G175700 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) G. raimondii v2.1 11643   Chr10: 51517626-51529268
fgenesh1_pm_13_num_133 (1 of 3) PF08148 - DSHCT (NUC185) domain (DSHCT) C. subellipsoidea C-169 v2.0 9352   scaffold_13: 1708638-1717989
MicpuC2.fgenesh1_pm.C_scaffold_11000014 (1 of 2) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) M. pusilla CCMP1545 v3.0 3953   scaffold_11: 230056-234008
e_gw2.02.27.1 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. sp RCC299 v3.0 3282   Chr_02: 1720308-1723589
estExt_Genewise_ext.C_Chr_60256 (1 of 2) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE O. lucimarinus v2.0 2883   Chr_6: 491901-494783
Thecc1EG027106 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) T. cacao v1.1 11205   scaffold_6: 1456239-1467443
Migut.N00862 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. guttatus v2.0 7526   scaffold_14: 5365336-5372861
Araha.56576s0002 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) A. halleri v1.1 5335   Scaffold56576: 11775-17109
Cagra.8195s0001 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) C. grandiflora v1.1 4659   Scaffold8195: 1-4659
Glyma.08G361900 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) G. max Wm82.a2.v1 13249   Chr08: 47343753-47357001
Brara.A02352 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) B. rapa FPsc v1.3 5166   A01: 18037735-18042900
Brara.I01587 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) B. rapa FPsc v1.3 5157   A09: 10478796-10483952
Bostr.10040s0255 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) B. stricta v1.2 6377   Scaffold10040: 2283806-2290182
Cre02.g117900 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) C. reinhardtii v5.6 HEL11 9213   chromosome_2: 6694347-6703559
Medtr7g080730 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. truncatula Mt4.0v1 10624   chr7: 30721960-30732583
SapurV1A.0225s0130 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) S. purpurea v1.0 11254   chr01: 18993449-19004702
evm_27.TU.AmTr_v1.0_scaffold00066.119 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) A. trichopoda v1.0 18614   AmTr_v1.0_scaffold00066: 1697424-1716037
Traes_4AL_F1033DD8F (1 of 10) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) T. aestivum v2.2 6499   ta_iwgsc_4al_v2_7088723: 1-6499
Eucgr.G00079 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) E. grandis v2.0 9847   Chr07: 948535-958381
Prupe.6G113400 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) P. persica v2.1 7567   Pp06: 8180289-8187855
GSMUA_Achr2G17890_001 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. acuminata v1 10952   chr2: 18367514-18378465
Manes.07G030200 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. esculenta v6.1 13400   Chromosome07: 2833935-2847334

72 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29609.m000590 R. communis v0.1 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Cucsa.120490.1 C. sativus v1.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
orange1.1g006319m C. sinensis v1.1 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
AT1G59760.1 A. thaliana TAIR10 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Thhalv10023236m E. salsugineum v1.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Ciclev10027747m C. clementina v1.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Lus10024454 L. usitatissimum v1.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5275 Viridiplantae
Lus10007442 L. usitatissimum v1.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5275 Viridiplantae
Gorai.010G175700.1 G. raimondii v2.1 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
37565 C. subellipsoidea C-169 v2.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
44758 M. pusilla CCMP1545 v3.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
78446 M. sp RCC299 v3.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
49799 O. lucimarinus v2.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Thecc1EG027106t1 T. cacao v1.1 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Migut.N00862.1.p M. guttatus v2.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Araha.56576s0002.1.p A. halleri v1.1 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Cagra.8195s0001.1.p C. grandiflora v1.1 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Glyma.08G361900.1.p G. max Wm82.a2.v1 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Brara.I01587.1.p B. rapa FPsc v1.3 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5275 Viridiplantae
Brara.A02352.1.p B. rapa FPsc v1.3 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5275 Viridiplantae
Bostr.10040s0255.1.p B. stricta v1.2 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Cre02.g117900.t1.1 C. reinhardtii v5.6 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Medtr7g080730.1 M. truncatula Mt4.0v1 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
SapurV1A.0225s0130.1.p S. purpurea v1.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00066.119 A. trichopoda v1.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Traes_4AL_F1033DD8F.1 T. aestivum v2.2 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Eucgr.G00079.1.p E. grandis v2.0 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Prupe.6G113400.1.p P. persica v2.1 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
GSMUA_Achr2P17890_001 M. acuminata v1 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Manes.07G030200.1.p M. esculenta v6.1 123424912 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae