Gene : Carub.0004s0796 C. rubella v1.1
Defline:  (1 of 247) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  796
Name:  ? Carub.0004s0796 Secondary Identifier:  ? PAC:39238538
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0796 0.5kb upstream 0.5kb upstream 2228 true scaffold_4: 5978692-5980919 Capsella rubella
Carub.0004s0796 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 5980420-5980919 Capsella rubella
Carub.0004s0796 0.5kb downstream 0.5kb downstream 2228 true scaffold_4: 5978192-5980419 Capsella rubella
Carub.0004s0796 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 5978192-5978691 Capsella rubella
Carub.0004s0796 1.0kb upstream 1.0kb upstream 2728 true scaffold_4: 5978692-5981419 Capsella rubella
Carub.0004s0796 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 5980420-5981419 Capsella rubella
Carub.0004s0796 1.0kb downstream 1.0kb downstream 2728 true scaffold_4: 5977692-5980419 Capsella rubella
Carub.0004s0796 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 5977692-5978691 Capsella rubella
Carub.0004s0796 2.0kb upstream 2.0kb upstream 3728 true scaffold_4: 5978692-5982419 Capsella rubella
Carub.0004s0796 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 5980420-5982419 Capsella rubella
Carub.0004s0796 2.0kb downstream 2.0kb downstream 3728 true scaffold_4: 5976692-5980419 Capsella rubella
Carub.0004s0796 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 5976692-5978691 Capsella rubella
Carub.0004s0796 5.0kb upstream 5.0kb upstream 6728 true scaffold_4: 5978692-5985419 Capsella rubella
Carub.0004s0796 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 5980420-5985419 Capsella rubella
Carub.0004s0796 5.0kb downstream 5.0kb downstream 6728 true scaffold_4: 5973692-5980419 Capsella rubella
Carub.0004s0796 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 5973692-5978691 Capsella rubella
Carub.0004s0796 10.0kb upstream 10.0kb upstream 11728 true scaffold_4: 5978692-5990419 Capsella rubella
Carub.0004s0796 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 5980420-5990419 Capsella rubella
Carub.0004s0796 10.0kb downstream 10.0kb downstream 11728 true scaffold_4: 5968692-5980419 Capsella rubella
Carub.0004s0796 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 5968692-5978691 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379985 5261 Brassicaceae View MSA
123841092 5264 Brassicales-Malvales View MSA
124347159 5266 SBM View MSA
124246707 5268 Malvidae View MSA
124069312 5270 Rosid View MSA
123753292 5271 Pentapetalae View MSA
122796166 5272 Eudicot View MSA
122047965 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310823 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain