Protein Family : RNA binding (RRM/RBD/RNP motifs) family protein 124246707

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  34

34 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30032.t000019 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) R. communis v0.1 1312   30032: 117818-119129
30055.t000068 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) R. communis v0.1 1976   30055: 358373-360348
orange1.1g048030m.g (1 of 186) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sinensis v1.1 440   scaffold00918: 40534-40973
orange1.1g032812m.g (1 of 186) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sinensis v1.1 1506   scaffold02155: 989-2494
orange1.1g032528m.g (1 of 186) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sinensis v1.1 1537   scaffold00018: 351734-353270
AT5G06210 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 1270   Chr5: 1878471-1879740
AT2G27330 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 1599   Chr2: 11695032-11696630
Thhalv10014928m.g (1 of 230) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) E. salsugineum v1.0 1400   scaffold_2: 1851113-1852512
Ciclev10012994m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 2096   scaffold_6: 20226864-20228959
Ciclev10029552m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 1622   scaffold_8: 19132837-19134458
Ciclev10023396m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 1273   scaffold_3: 31457875-31459147
Ciclev10024110m.g (1 of 4) KOG0114 - Predicted RNA-binding protein (RRM superfamily) C. clementina v1.0 1384   scaffold_3: 31429769-31431152
Lus10013306.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 1442   scaffold812: 55722-57163
Gorai.006G152700 (1 of 7) KOG0121 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) G. raimondii v2.1 1702   Chr06: 41157674-41159375
Thecc1EG022707 (1 of 13) KOG0114 - Predicted RNA-binding protein (RRM superfamily) T. cacao v1.1 1914   scaffold_5: 6767465-6769378
Thecc1EG041357 (1 of 1) K13195 - cold-inducible RNA-binding protein (CIRBP) T. cacao v1.1 1898   scaffold_9: 37222756-37224653
Araha.9394s0005 (1 of 225) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. halleri v1.1 1220   Scaffold9394: 11310-12529
Cagra.2117s0042 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. grandiflora v1.1 1226   Scaffold2117: 159073-160298
Cagra.3125s0009 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. grandiflora v1.1 1695   Scaffold3125: 38508-40202
Brara.B00201 (1 of 340) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. rapa FPsc v1.3 1164   A02: 976938-978101
Brara.C02431 (1 of 340) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. rapa FPsc v1.3 1766   A03: 12209197-12210962
Bostr.28794s0032 (1 of 9) KOG0114 - Predicted RNA-binding protein (RRM superfamily) B. stricta v1.2 2028   Scaffold28794: 250872-252899
Bostr.13129s0353 (1 of 225) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. stricta v1.2 1311   Scaffold13129: 1624827-1626137
SapurV1A.1211s0070 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) S. purpurea v1.0 2163   chr06: 15138144-15140306
SapurV1A.0561s0240 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) S. purpurea v1.0 1861   chr09: 12213279-12215139
Manes.09G051700 (1 of 2) KOG4208 - Nucleolar RNA-binding protein NIFK M. esculenta v6.1 2654   Chromosome09: 6876212-6878865
Manes.11G164200 (1 of 275) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M. esculenta v6.1 2156   Chromosome11: 27175643-27177798
AL6G16210 (1 of 3) K13195 - cold-inducible RNA-binding protein (CIRBP) A. lyrata v2.1 1098   scaffold_6: 2311376-2312473
Potri.006G208500 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) P. trichocarpa v3.1 2619   Chr06: 22381622-22384240
Potri.009G160300 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) P. trichocarpa v3.1 2000   Chr09: 12372384-12374383

34 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30032.m000469 R. communis v0.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Lus10013306 L. usitatissimum v1.0 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Cagra.2117s0042.1.p C. grandiflora v1.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
SapurV1A.1211s0070.1.p S. purpurea v1.0 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
AL6G16210.t1 A. lyrata v2.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Podel.09G166400.1.p P. deltoides WV94 v2.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Carub.0004s0796.1.p C. rubella v1.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
30055.m001598 R. communis v0.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
orange1.1g032812m C. sinensis v1.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 3 5268 Malvidae
orange1.1g048030m C. sinensis v1.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 3 5268 Malvidae
orange1.1g032528m C. sinensis v1.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 3 5268 Malvidae
AT5G06210.1 A. thaliana TAIR10 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
AT2G27330.1 A. thaliana TAIR10 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Thhalv10014928m E. salsugineum v1.0 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Ciclev10012994m C. clementina v1.0 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 4 5268 Malvidae
Ciclev10024110m C. clementina v1.0 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 4 5268 Malvidae
Ciclev10029552m C. clementina v1.0 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 4 5268 Malvidae
Ciclev10023396m C. clementina v1.0 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 4 5268 Malvidae
Gorai.006G152700.1 G. raimondii v2.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Thecc1EG022707t6 T. cacao v1.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Thecc1EG041357t1 T. cacao v1.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Araha.9394s0005.1.p A. halleri v1.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 1 5268 Malvidae
Cagra.3125s0009.1.p C. grandiflora v1.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Brara.C02431.1.p B. rapa FPsc v1.3 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Brara.B00201.1.p B. rapa FPsc v1.3 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Bostr.28794s0032.1.p B. stricta v1.2 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Bostr.13129s0353.1.p B. stricta v1.2 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
SapurV1A.0561s0240.1.p S. purpurea v1.0 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Manes.09G051700.1.p M. esculenta v6.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae
Manes.11G164200.1.p M. esculenta v6.1 124246707 RNA binding (RRM/RBD/RNP motifs) family protein 2 5268 Malvidae