Gene : Carub.0004s1925 C. rubella v1.1
Defline:  (1 of 1) KOG0114//KOG4207 - Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily Genomic Order:  1925
Name:  ? Carub.0004s1925 Secondary Identifier:  ? PAC:39238687
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1925 0.5kb upstream 0.5kb upstream 2576 true scaffold_4: 10693360-10695935 Capsella rubella
Carub.0004s1925 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10695436-10695935 Capsella rubella
Carub.0004s1925 0.5kb downstream 0.5kb downstream 2576 true scaffold_4: 10692860-10695435 Capsella rubella
Carub.0004s1925 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10692860-10693359 Capsella rubella
Carub.0004s1925 1.0kb upstream 1.0kb upstream 3076 true scaffold_4: 10693360-10696435 Capsella rubella
Carub.0004s1925 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10695436-10696435 Capsella rubella
Carub.0004s1925 1.0kb downstream 1.0kb downstream 3076 true scaffold_4: 10692360-10695435 Capsella rubella
Carub.0004s1925 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10692360-10693359 Capsella rubella
Carub.0004s1925 2.0kb upstream 2.0kb upstream 4076 true scaffold_4: 10693360-10697435 Capsella rubella
Carub.0004s1925 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10695436-10697435 Capsella rubella
Carub.0004s1925 2.0kb downstream 2.0kb downstream 4076 true scaffold_4: 10691360-10695435 Capsella rubella
Carub.0004s1925 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10691360-10693359 Capsella rubella
Carub.0004s1925 5.0kb upstream 5.0kb upstream 7076 true scaffold_4: 10693360-10700435 Capsella rubella
Carub.0004s1925 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10695436-10700435 Capsella rubella
Carub.0004s1925 5.0kb downstream 5.0kb downstream 7076 true scaffold_4: 10688360-10695435 Capsella rubella
Carub.0004s1925 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10688360-10693359 Capsella rubella
Carub.0004s1925 10.0kb upstream 10.0kb upstream 12076 true scaffold_4: 10693360-10705435 Capsella rubella
Carub.0004s1925 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10695436-10705435 Capsella rubella
Carub.0004s1925 10.0kb downstream 10.0kb downstream 12076 true scaffold_4: 10683360-10695435 Capsella rubella
Carub.0004s1925 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10683360-10693359 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369232 5261 Brassicaceae View MSA
123837908 5264 Brassicales-Malvales View MSA
124344702 5266 SBM View MSA
124237572 5268 Malvidae View MSA
124062846 5270 Rosid View MSA
123750776 5271 Pentapetalae View MSA
122794674 5272 Eudicot View MSA
122050337 5273 Angiosperm View MSA
121345725 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain