Gene : Carub.0005s0666 C. rubella v1.1
Defline:  (1 of 2) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 Genomic Order:  666
Name:  ? Carub.0005s0666 Secondary Identifier:  ? PAC:39225149
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0666 0.5kb upstream 0.5kb upstream 1860 true scaffold_5: 2768187-2770046 Capsella rubella
Carub.0005s0666 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2768187-2768686 Capsella rubella
Carub.0005s0666 0.5kb downstream 0.5kb downstream 1860 true scaffold_5: 2768687-2770546 Capsella rubella
Carub.0005s0666 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2770047-2770546 Capsella rubella
Carub.0005s0666 1.0kb upstream 1.0kb upstream 2360 true scaffold_5: 2767687-2770046 Capsella rubella
Carub.0005s0666 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2767687-2768686 Capsella rubella
Carub.0005s0666 1.0kb downstream 1.0kb downstream 2360 true scaffold_5: 2768687-2771046 Capsella rubella
Carub.0005s0666 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2770047-2771046 Capsella rubella
Carub.0005s0666 2.0kb upstream 2.0kb upstream 3360 true scaffold_5: 2766687-2770046 Capsella rubella
Carub.0005s0666 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2766687-2768686 Capsella rubella
Carub.0005s0666 2.0kb downstream 2.0kb downstream 3360 true scaffold_5: 2768687-2772046 Capsella rubella
Carub.0005s0666 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2770047-2772046 Capsella rubella
Carub.0005s0666 5.0kb upstream 5.0kb upstream 6360 true scaffold_5: 2763687-2770046 Capsella rubella
Carub.0005s0666 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2763687-2768686 Capsella rubella
Carub.0005s0666 5.0kb downstream 5.0kb downstream 6360 true scaffold_5: 2768687-2775046 Capsella rubella
Carub.0005s0666 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2770047-2775046 Capsella rubella
Carub.0005s0666 10.0kb upstream 10.0kb upstream 11360 true scaffold_5: 2758687-2770046 Capsella rubella
Carub.0005s0666 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2758687-2768686 Capsella rubella
Carub.0005s0666 10.0kb downstream 10.0kb downstream 11360 true scaffold_5: 2768687-2780046 Capsella rubella
Carub.0005s0666 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2770047-2780046 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378580 5261 Brassicaceae View MSA
123836516 5264 Brassicales-Malvales View MSA
124343954 5266 SBM View MSA
124252850 5268 Malvidae View MSA
124064557 5270 Rosid View MSA
123737242 5271 Pentapetalae View MSA
122793388 5272 Eudicot View MSA
122048746 5273 Angiosperm View MSA
121311093 5274 Embryophyte View MSA
123348440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain