Gene : Carub.0005s1206 C. rubella v1.1
Defline:  (1 of 1) PTHR31057//PTHR31057:SF0 - FAMILY NOT NAMED // E3 UFM1-PROTEIN LIGASE 1 Genomic Order:  1206
Name:  ? Carub.0005s1206 Secondary Identifier:  ? PAC:39226842
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1206 0.5kb upstream 0.5kb upstream 5507 true scaffold_5: 6975953-6981459 Capsella rubella
Carub.0005s1206 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6975953-6976452 Capsella rubella
Carub.0005s1206 0.5kb downstream 0.5kb downstream 5507 true scaffold_5: 6976453-6981959 Capsella rubella
Carub.0005s1206 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6981460-6981959 Capsella rubella
Carub.0005s1206 1.0kb upstream 1.0kb upstream 6007 true scaffold_5: 6975453-6981459 Capsella rubella
Carub.0005s1206 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6975453-6976452 Capsella rubella
Carub.0005s1206 1.0kb downstream 1.0kb downstream 6007 true scaffold_5: 6976453-6982459 Capsella rubella
Carub.0005s1206 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6981460-6982459 Capsella rubella
Carub.0005s1206 2.0kb upstream 2.0kb upstream 7007 true scaffold_5: 6974453-6981459 Capsella rubella
Carub.0005s1206 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6974453-6976452 Capsella rubella
Carub.0005s1206 2.0kb downstream 2.0kb downstream 7007 true scaffold_5: 6976453-6983459 Capsella rubella
Carub.0005s1206 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6981460-6983459 Capsella rubella
Carub.0005s1206 5.0kb upstream 5.0kb upstream 10007 true scaffold_5: 6971453-6981459 Capsella rubella
Carub.0005s1206 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6971453-6976452 Capsella rubella
Carub.0005s1206 5.0kb downstream 5.0kb downstream 10007 true scaffold_5: 6976453-6986459 Capsella rubella
Carub.0005s1206 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6981460-6986459 Capsella rubella
Carub.0005s1206 10.0kb upstream 10.0kb upstream 15007 true scaffold_5: 6966453-6981459 Capsella rubella
Carub.0005s1206 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6966453-6976452 Capsella rubella
Carub.0005s1206 10.0kb downstream 10.0kb downstream 15007 true scaffold_5: 6976453-6991459 Capsella rubella
Carub.0005s1206 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6981460-6991459 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026361 5273 Angiosperm View MSA
122361519 5261 Brassicaceae View MSA
123834295 5264 Brassicales-Malvales View MSA
124342202 5266 SBM View MSA
124238478 5268 Malvidae View MSA
124064976 5270 Rosid View MSA
123747410 5271 Pentapetalae View MSA
122787420 5272 Eudicot View MSA
121346113 5274 Embryophyte View MSA
123424330 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain