Protein : Carub.0005s1976.1.p C. rubella v1.1

Secondary Identifier:  PAC:39225870 Organism Name:  Capsella rubella
Length:  808   Name:  Carub.0005s1976.1.p
Quick Links:
 
Quick Links:
 

Ontology Annotation Displayer

Protein Family Displayer

Protein Feature Displayer

Proteins

8 Protein Domains

DB identifier Type Name
IPR027417 Domain P-loop containing nucleoside triphosphate hydrolase
IPR003959 Domain ATPase, AAA-type, core
IPR008824 Domain Holliday junction DNA helicase ruvB, N-terminal
IPR029067 Domain CDC48 domain 2-like
IPR009010 Domain Aspartate decarboxylase-like domain
IPR004201 Domain CDC48, domain 2
IPR005938 Family AAA ATPase, CDC48 family
IPR003338 Domain CDC48, N-terminal subdomain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0005s1976.1_CDS 2427   scaffold_5: 9866676-9870126 Capsella rubella

31 Ontology Annotations

Ontology Term Db Gene/Protein Name
K13525 KEGG Carub.0005s1976.1.p
3.6.4.6-RXN MetaCyc Carub.0005s1976.1.p
IPR027417 InterPro Carub.0005s1976.1.p
IPR029067 InterPro Carub.0005s1976.1.p
PF02359 PFAM Carub.0005s1976.1.p
PF02933 PFAM Carub.0005s1976.1.p
PTHR23077 PANTHER Carub.0005s1976.1.p
PTHR23077:SF82 PANTHER Carub.0005s1976.1.p
IPR003338 InterPro Carub.0005s1976.1.p
IPR003959 InterPro Carub.0005s1976.1.p
GO:0009378 GO Carub.0005s1976.1.p
GO:0016787 GO Carub.0005s1976.1.p
IPR008824 InterPro Carub.0005s1976.1.p
IPR009010 InterPro Carub.0005s1976.1.p
IPR004201 InterPro Carub.0005s1976.1.p
IPR005938 InterPro Carub.0005s1976.1.p
SM01072 SMART Carub.0005s1976.1.p
SSF50692 SSF Carub.0005s1976.1.p
PF05496 PFAM Carub.0005s1976.1.p
PF07724 PFAM Carub.0005s1976.1.p
TIGR01243 TIGRFAMs Carub.0005s1976.1.p
SSF52540 SSF Carub.0005s1976.1.p
SSF54585 SSF Carub.0005s1976.1.p
G3DSA:2.40.40.20 GENE3D Carub.0005s1976.1.p
G3DSA:3.10.330.10 GENE3D Carub.0005s1976.1.p
3.6.4.6 ENZYME Carub.0005s1976.1.p
G3DSA:1.10.8.60 GENE3D Carub.0005s1976.1.p
GO:0006281 GO Carub.0005s1976.1.p
GO:0006310 GO Carub.0005s1976.1.p
G3DSA:3.40.50.300 GENE3D Carub.0005s1976.1.p

0 Pathway Components

0 Pathways