Gene : Carub.0001s0116 C. rubella v1.1
Defline:  (1 of 1) K12133 - MYB-related transcription factor LHY (LHY) Genomic Order:  116
Name:  ? Carub.0001s0116 Secondary Identifier:  ? PAC:39228870
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0116 0.5kb upstream 0.5kb upstream 4387 true scaffold_1: 406051-410437 Capsella rubella
Carub.0001s0116 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 406051-406550 Capsella rubella
Carub.0001s0116 0.5kb downstream 0.5kb downstream 4387 true scaffold_1: 406551-410937 Capsella rubella
Carub.0001s0116 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 410438-410937 Capsella rubella
Carub.0001s0116 1.0kb upstream 1.0kb upstream 4887 true scaffold_1: 405551-410437 Capsella rubella
Carub.0001s0116 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 405551-406550 Capsella rubella
Carub.0001s0116 1.0kb downstream 1.0kb downstream 4887 true scaffold_1: 406551-411437 Capsella rubella
Carub.0001s0116 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 410438-411437 Capsella rubella
Carub.0001s0116 2.0kb upstream 2.0kb upstream 5887 true scaffold_1: 404551-410437 Capsella rubella
Carub.0001s0116 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 404551-406550 Capsella rubella
Carub.0001s0116 2.0kb downstream 2.0kb downstream 5887 true scaffold_1: 406551-412437 Capsella rubella
Carub.0001s0116 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 410438-412437 Capsella rubella
Carub.0001s0116 5.0kb upstream 5.0kb upstream 8887 true scaffold_1: 401551-410437 Capsella rubella
Carub.0001s0116 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 401551-406550 Capsella rubella
Carub.0001s0116 5.0kb downstream 5.0kb downstream 8887 true scaffold_1: 406551-415437 Capsella rubella
Carub.0001s0116 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 410438-415437 Capsella rubella
Carub.0001s0116 10.0kb upstream 10.0kb upstream 13887 true scaffold_1: 396551-410437 Capsella rubella
Carub.0001s0116 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 396551-406550 Capsella rubella
Carub.0001s0116 10.0kb downstream 10.0kb downstream 13887 true scaffold_1: 406551-420437 Capsella rubella
Carub.0001s0116 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 410438-420437 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372845 5261 Brassicaceae View MSA
123827456 5264 Brassicales-Malvales View MSA
124346704 5266 SBM View MSA
124237237 5268 Malvidae View MSA
124066959 5270 Rosid View MSA
123746755 5271 Pentapetalae View MSA
122793236 5272 Eudicot View MSA
122048982 5273 Angiosperm View MSA
121350117 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain