Gene : Carub.0001s1441 C. rubella v1.1
Defline:  (1 of 4) K12825 - splicing factor 3A subunit 1 (SF3A1, SAP114) Genomic Order:  1441
Name:  ? Carub.0001s1441 Secondary Identifier:  ? PAC:39227162
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1441 0.5kb upstream 0.5kb upstream 3740 true scaffold_1: 5118797-5122536 Capsella rubella
Carub.0001s1441 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5118797-5119296 Capsella rubella
Carub.0001s1441 0.5kb downstream 0.5kb downstream 3740 true scaffold_1: 5119297-5123036 Capsella rubella
Carub.0001s1441 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5122537-5123036 Capsella rubella
Carub.0001s1441 1.0kb upstream 1.0kb upstream 4240 true scaffold_1: 5118297-5122536 Capsella rubella
Carub.0001s1441 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5118297-5119296 Capsella rubella
Carub.0001s1441 1.0kb downstream 1.0kb downstream 4240 true scaffold_1: 5119297-5123536 Capsella rubella
Carub.0001s1441 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5122537-5123536 Capsella rubella
Carub.0001s1441 2.0kb upstream 2.0kb upstream 5240 true scaffold_1: 5117297-5122536 Capsella rubella
Carub.0001s1441 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5117297-5119296 Capsella rubella
Carub.0001s1441 2.0kb downstream 2.0kb downstream 5240 true scaffold_1: 5119297-5124536 Capsella rubella
Carub.0001s1441 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5122537-5124536 Capsella rubella
Carub.0001s1441 5.0kb upstream 5.0kb upstream 8240 true scaffold_1: 5114297-5122536 Capsella rubella
Carub.0001s1441 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5114297-5119296 Capsella rubella
Carub.0001s1441 5.0kb downstream 5.0kb downstream 8240 true scaffold_1: 5119297-5127536 Capsella rubella
Carub.0001s1441 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5122537-5127536 Capsella rubella
Carub.0001s1441 10.0kb upstream 10.0kb upstream 13240 true scaffold_1: 5109297-5122536 Capsella rubella
Carub.0001s1441 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5109297-5119296 Capsella rubella
Carub.0001s1441 10.0kb downstream 10.0kb downstream 13240 true scaffold_1: 5119297-5132536 Capsella rubella
Carub.0001s1441 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5122537-5132536 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041332 5273 Angiosperm View MSA
122364426 5261 Brassicaceae View MSA
123840698 5264 Brassicales-Malvales View MSA
124342903 5266 SBM View MSA
124237111 5268 Malvidae View MSA
124066763 5270 Rosid View MSA
123748218 5271 Pentapetalae View MSA
122792189 5272 Eudicot View MSA
121344762 5274 Embryophyte View MSA
123425409 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain