Gene : Carub.0002s0424 C. rubella v1.1
Defline:  (1 of 4) PTHR31232:SF6 - SELF-INCOMPATIBILITY S1 FAMILY PROTEIN Genomic Order:  424
Name:  ? Carub.0002s0424 Secondary Identifier:  ? PAC:39245357
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0424 0.5kb upstream 0.5kb upstream 1044 true scaffold_2: 1793704-1794747 Capsella rubella
Carub.0002s0424 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1794248-1794747 Capsella rubella
Carub.0002s0424 0.5kb downstream 0.5kb downstream 1044 true scaffold_2: 1793204-1794247 Capsella rubella
Carub.0002s0424 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1793204-1793703 Capsella rubella
Carub.0002s0424 1.0kb upstream 1.0kb upstream 1544 true scaffold_2: 1793704-1795247 Capsella rubella
Carub.0002s0424 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1794248-1795247 Capsella rubella
Carub.0002s0424 1.0kb downstream 1.0kb downstream 1544 true scaffold_2: 1792704-1794247 Capsella rubella
Carub.0002s0424 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1792704-1793703 Capsella rubella
Carub.0002s0424 2.0kb upstream 2.0kb upstream 2544 true scaffold_2: 1793704-1796247 Capsella rubella
Carub.0002s0424 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1794248-1796247 Capsella rubella
Carub.0002s0424 2.0kb downstream 2.0kb downstream 2544 true scaffold_2: 1791704-1794247 Capsella rubella
Carub.0002s0424 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1791704-1793703 Capsella rubella
Carub.0002s0424 5.0kb upstream 5.0kb upstream 5544 true scaffold_2: 1793704-1799247 Capsella rubella
Carub.0002s0424 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1794248-1799247 Capsella rubella
Carub.0002s0424 5.0kb downstream 5.0kb downstream 5544 true scaffold_2: 1788704-1794247 Capsella rubella
Carub.0002s0424 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1788704-1793703 Capsella rubella
Carub.0002s0424 10.0kb upstream 10.0kb upstream 10544 true scaffold_2: 1793704-1804247 Capsella rubella
Carub.0002s0424 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1794248-1804247 Capsella rubella
Carub.0002s0424 10.0kb downstream 10.0kb downstream 10544 true scaffold_2: 1783704-1794247 Capsella rubella
Carub.0002s0424 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1783704-1793703 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376953 5261 Brassicaceae View MSA
123841059 5264 Brassicales-Malvales View MSA
124350397 5266 SBM View MSA
124252720 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain