Gene : Carub.0002s0198 C. rubella v1.1
Defline:  (1 of 1) K16250 - DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] (NRPD1) Genomic Order:  198
Name:  ? Carub.0002s0198 Secondary Identifier:  ? PAC:39243475
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0198 0.5kb upstream 0.5kb upstream 7847 true scaffold_2: 808800-816646 Capsella rubella
Carub.0002s0198 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 808800-809299 Capsella rubella
Carub.0002s0198 0.5kb downstream 0.5kb downstream 7847 true scaffold_2: 809300-817146 Capsella rubella
Carub.0002s0198 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 816647-817146 Capsella rubella
Carub.0002s0198 1.0kb upstream 1.0kb upstream 8347 true scaffold_2: 808300-816646 Capsella rubella
Carub.0002s0198 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 808300-809299 Capsella rubella
Carub.0002s0198 1.0kb downstream 1.0kb downstream 8347 true scaffold_2: 809300-817646 Capsella rubella
Carub.0002s0198 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 816647-817646 Capsella rubella
Carub.0002s0198 2.0kb upstream 2.0kb upstream 9347 true scaffold_2: 807300-816646 Capsella rubella
Carub.0002s0198 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 807300-809299 Capsella rubella
Carub.0002s0198 2.0kb downstream 2.0kb downstream 9347 true scaffold_2: 809300-818646 Capsella rubella
Carub.0002s0198 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 816647-818646 Capsella rubella
Carub.0002s0198 5.0kb upstream 5.0kb upstream 12347 true scaffold_2: 804300-816646 Capsella rubella
Carub.0002s0198 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 804300-809299 Capsella rubella
Carub.0002s0198 5.0kb downstream 5.0kb downstream 12347 true scaffold_2: 809300-821646 Capsella rubella
Carub.0002s0198 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 816647-821646 Capsella rubella
Carub.0002s0198 10.0kb upstream 10.0kb upstream 17347 true scaffold_2: 799300-816646 Capsella rubella
Carub.0002s0198 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 799300-809299 Capsella rubella
Carub.0002s0198 10.0kb downstream 10.0kb downstream 17347 true scaffold_2: 809300-826646 Capsella rubella
Carub.0002s0198 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 816647-826646 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372243 5261 Brassicaceae View MSA
123828844 5264 Brassicales-Malvales View MSA
124337732 5266 SBM View MSA
124238381 5268 Malvidae View MSA
124061833 5270 Rosid View MSA
123751056 5271 Pentapetalae View MSA
122788895 5272 Eudicot View MSA
122051647 5273 Angiosperm View MSA
121348824 5274 Embryophyte View MSA
123381031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain