Protein Family : RNA polymerase Rpb1, domain 2 family protein, expressed 122051647

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  146

146 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30131.t000348 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) R. communis v0.1 5558   30131: 2163452-2169009
30190.t000349 (1 of 1) K16250 - DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] (NRPD1) R. communis v0.1 13622   30190: 1916062-1929683
Cucsa.330520 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 C. sativus v1.0 24549   scaffold03223: 37137-61685
Cucsa.041530 (1 of 1) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 C. sativus v1.0 13005   scaffold00540: 71891-84895
orange1.1g000525m.g (1 of 1) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 C. sinensis v1.1 14431   scaffold00040: 317155-331585
orange1.1g000291m.g (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 C. sinensis v1.1 13079   scaffold00139: 323616-336694
AT1G63020 (1 of 1) K16250 - DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] (NRPD1) A. thaliana TAIR10 NRPD1A 7880   Chr1: 23354685-23362564
AT2G40030 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) A. thaliana TAIR10 NRPD1B 9090   Chr2: 16714494-16723583
Thhalv10016128m.g (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 E. salsugineum v1.0 8985   scaffold_10: 10564804-10573788
Thhalv10023214m.g (1 of 1) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 E. salsugineum v1.0 5954   scaffold_8: 1266290-1272243
Ciclev10018489m.g (1 of 1) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 C. clementina v1.0 13662   scaffold_3: 6765569-6779230
Ciclev10004129m.g (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 C. clementina v1.0 13345   scaffold_9: 12212755-12226099
Lus10006339.g (1 of 2) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 L. usitatissimum v1.0 6324   scaffold1072: 190246-196569
Lus10002748.g (1 of 1) PF00623//PF04983//PF04997//PF04998//PF11523 - RNA polymerase Rpb1, domain 2 (RNA_pol_Rpb1_2) // RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 1 (RNA_pol_Rpb1_1) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // Protein of unknown function (DUF3223) (DUF3223) L. usitatissimum v1.0 10441   scaffold2896: 60656-71096
Lus10002955.g (1 of 2) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 L. usitatissimum v1.0 6286   scaffold2416: 4372-10657
Lus10016332.g (1 of 1) PF04983//PF04998//PF11523 - RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // Protein of unknown function (DUF3223) (DUF3223) L. usitatissimum v1.0 6563   scaffold179: 74030-80592
Gorai.004G207300 (1 of 2) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 G. raimondii v2.1 11905   Chr04: 53813408-53825312
Gorai.010G216600 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 G. raimondii v2.1 15584   Chr10: 58463706-58479289
Gorai.007G022200 (1 of 2) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 G. raimondii v2.1 7465   Chr07: 1605147-1612611
Thecc1EG045152 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) T. cacao v1.1 20121   scaffold_10r: 22643178-22663298
Thecc1EG016168 (1 of 1) K16250 - DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] (NRPD1) T. cacao v1.1 15714   scaffold_3: 31623992-31639705
Migut.A00916 (1 of 1) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 M. guttatus v2.0 8761   scaffold_1: 5633177-5641937
Migut.B01227 (1 of 1) PTHR19376:SF7 - DNA-DIRECTED RNA POLYMERASE M. guttatus v2.0 14110   scaffold_2: 14473813-14487922
Araha.27262s0001 (1 of 1) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 A. halleri v1.1 7614   Scaffold27262: 1348-8961
Araha.54531s0001 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 A. halleri v1.1 7904   Scaffold54531: 3-7906
Cagra.2495s0018 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 C. grandiflora v1.1 9007   Scaffold2495: 62460-71466
Cagra.6357s0008 (1 of 1) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 C. grandiflora v1.1 7289   Scaffold6357: 35116-42404
Glyma.11G026700 (1 of 2) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 G. max Wm82.a2.v1 14510   Chr11: 1908384-1922893
Glyma.13G196900 (1 of 2) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 G. max Wm82.a2.v1 16623   Chr13: 31055891-31072513
Glyma.15G235900 (1 of 2) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 G. max Wm82.a2.v1 16662   Chr15: 44346879-44363540

146 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30131.m007197 R. communis v0.1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
30190.m011113 R. communis v0.1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
orange1.1g000291m C. sinensis v1.1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
orange1.1g000525m C. sinensis v1.1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
AT2G40030.1 A. thaliana TAIR10 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
AT1G63020.1 A. thaliana TAIR10 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
Ciclev10018489m C. clementina v1.0 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
Lus10006339 L. usitatissimum v1.0 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 4 5273 Angiosperm
Glyma.11G026700.1.p G. max Wm82.a2.v1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 4 5273 Angiosperm
Glyma.01G215700.1.p G. max Wm82.a2.v1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 4 5273 Angiosperm
Brara.C02049.1.p B. rapa FPsc v1.3 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
Bostr.22157s0020.1.p B. stricta v1.2 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
SapurV1A.0282s0120.1.p S. purpurea v1.0 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00069.119 A. trichopoda v1.0 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 1 5273 Angiosperm
Traes_1DS_FA7FC5C3C.4 T. aestivum v2.2 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 5 5273 Angiosperm
Traes_1BS_B0BB95B97.2 T. aestivum v2.2 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 5 5273 Angiosperm
Traes_3AL_E77A5F03A.1 T. aestivum v2.2 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 5 5273 Angiosperm
Traes_1AS_3EF7D1A61.2 T. aestivum v2.2 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 5 5273 Angiosperm
Traes_3DL_27714B179.1 T. aestivum v2.2 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 5 5273 Angiosperm
Eucgr.D01929.1.p E. grandis v2.0 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
Prupe.5G089300.1.p P. persica v2.1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
GSMUA_Achr3P05700_001 M. acuminata v1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
GSMUA_Achr8P12010_001 M. acuminata v1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 2 5273 Angiosperm
Kalax.0073s0075.1.p K. laxiflora v1.1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 4 5273 Angiosperm
Seita.1G086100.1.p S. italica v2.2 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 3 5273 Angiosperm
Seita.7G138600.1.p S. italica v2.2 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 3 5273 Angiosperm
Bradi2g34876.2.p B. distachyon v3.1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 3 5273 Angiosperm
Bradi2g61683.1.p B. distachyon v3.1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 3 5273 Angiosperm
Bradi4g45065.1.p B. distachyon v3.1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 3 5273 Angiosperm
Brast08G196200.1.p B. stacei v1.1 122051647 RNA polymerase Rpb1, domain 2 family protein, expressed 3 5273 Angiosperm