Gene : Araha.54531s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 Genomic Order:  1
Name:  ? Araha.54531s0001 Secondary Identifier:  ? PAC:28849249

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.54531s0001 0.5kb upstream 0.5kb upstream 8404 true Scaffold54531: 3-8406 Arabidopsis halleri
Araha.54531s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold54531: 7907-8406 Arabidopsis halleri
Araha.54531s0001 0.5kb downstream 0.5kb downstream 7906 true Scaffold54531: 1-7906 Arabidopsis halleri
Araha.54531s0001 0.5kb downstream 0.5kb downstream 2 false Scaffold54531: 1-2 Arabidopsis halleri
Araha.54531s0001 1.0kb upstream 1.0kb upstream 8904 true Scaffold54531: 3-8906 Arabidopsis halleri
Araha.54531s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold54531: 7907-8906 Arabidopsis halleri
Araha.54531s0001 1.0kb downstream 1.0kb downstream 7906 true Scaffold54531: 1-7906 Arabidopsis halleri
Araha.54531s0001 1.0kb downstream 1.0kb downstream 2 false Scaffold54531: 1-2 Arabidopsis halleri
Araha.54531s0001 2.0kb upstream 2.0kb upstream 9260 true Scaffold54531: 3-9262 Arabidopsis halleri
Araha.54531s0001 2.0kb upstream 2.0kb upstream 1356 false Scaffold54531: 7907-9262 Arabidopsis halleri
Araha.54531s0001 2.0kb downstream 2.0kb downstream 7906 true Scaffold54531: 1-7906 Arabidopsis halleri
Araha.54531s0001 2.0kb downstream 2.0kb downstream 2 false Scaffold54531: 1-2 Arabidopsis halleri
Araha.54531s0001 5.0kb upstream 5.0kb upstream 9260 true Scaffold54531: 3-9262 Arabidopsis halleri
Araha.54531s0001 5.0kb upstream 5.0kb upstream 1356 false Scaffold54531: 7907-9262 Arabidopsis halleri
Araha.54531s0001 5.0kb downstream 5.0kb downstream 7906 true Scaffold54531: 1-7906 Arabidopsis halleri
Araha.54531s0001 5.0kb downstream 5.0kb downstream 2 false Scaffold54531: 1-2 Arabidopsis halleri
Araha.54531s0001 10.0kb upstream 10.0kb upstream 9260 true Scaffold54531: 3-9262 Arabidopsis halleri
Araha.54531s0001 10.0kb upstream 10.0kb upstream 1356 false Scaffold54531: 7907-9262 Arabidopsis halleri
Araha.54531s0001 10.0kb downstream 10.0kb downstream 7906 true Scaffold54531: 1-7906 Arabidopsis halleri
Araha.54531s0001 10.0kb downstream 10.0kb downstream 2 false Scaffold54531: 1-2 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377693 5261 Brassicaceae View MSA
123831307 5264 Brassicales-Malvales View MSA
124344169 5266 SBM View MSA
124237894 5268 Malvidae View MSA
124050445 5270 Rosid View MSA
123745673 5271 Pentapetalae View MSA
122786739 5272 Eudicot View MSA
122051647 5273 Angiosperm View MSA
121348824 5274 Embryophyte View MSA
123381031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain