Protein Family : nuclear RNA polymerase D1B 122786739

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  42

42 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Cucsa.330520 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 C. sativus v1.0 24549   scaffold03223: 37137-61685
orange1.1g000291m.g (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 C. sinensis v1.1 13079   scaffold00139: 323616-336694
AT2G40030 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) A. thaliana TAIR10 NRPD1B 9090   Chr2: 16714494-16723583
Thhalv10016128m.g (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 E. salsugineum v1.0 8985   scaffold_10: 10564804-10573788
Ciclev10004129m.g (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 C. clementina v1.0 13345   scaffold_9: 12212755-12226099
Lus10002748.g (1 of 1) PF00623//PF04983//PF04997//PF04998//PF11523 - RNA polymerase Rpb1, domain 2 (RNA_pol_Rpb1_2) // RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 1 (RNA_pol_Rpb1_1) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // Protein of unknown function (DUF3223) (DUF3223) L. usitatissimum v1.0 10441   scaffold2896: 60656-71096
Lus10016332.g (1 of 1) PF04983//PF04998//PF11523 - RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // Protein of unknown function (DUF3223) (DUF3223) L. usitatissimum v1.0 6563   scaffold179: 74030-80592
Gorai.010G216600 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 G. raimondii v2.1 15584   Chr10: 58463706-58479289
Thecc1EG045152 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) T. cacao v1.1 20121   scaffold_10r: 22643178-22663298
Migut.B01227 (1 of 1) PTHR19376:SF7 - DNA-DIRECTED RNA POLYMERASE M. guttatus v2.0 14110   scaffold_2: 14473813-14487922
Araha.54531s0001 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 A. halleri v1.1 7904   Scaffold54531: 3-7906
Cagra.2495s0018 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 C. grandiflora v1.1 9007   Scaffold2495: 62460-71466
Glyma.13G196900 (1 of 2) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 G. max Wm82.a2.v1 16623   Chr13: 31055891-31072513
Glyma.15G235900 (1 of 2) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 G. max Wm82.a2.v1 16662   Chr15: 44346879-44363540
Brara.C02049 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 B. rapa FPsc v1.3 9341   A03: 10199761-10209101
Bostr.23794s0061 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 B. stricta v1.2 9083   Scaffold23794: 297596-306678
Medtr8g038990 (1 of 2) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 M. truncatula Mt4.0v1 16849   chr8: 14459096-14475944
SapurV1A.0009s1030 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) S. purpurea v1.0 15588   chr03: 15376229-15391816
Eucgr.J01182 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 E. grandis v2.0 14379   Chr10: 12922880-12937258
Prupe.2G035500 (1 of 2) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 P. persica v2.1 15683   Pp02: 3834200-3849882
Manes.04G159600 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 M. esculenta v6.1 17869   Chromosome04: 28156866-28174734
Kalax.0190s0018 (1 of 2) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 K. laxiflora v1.1 13188   scaffold_190: 227627-240814
Kalax.0213s0042 (1 of 2) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 K. laxiflora v1.1 13410   scaffold_213: 320304-333713
Aqcoe7G443200 (1 of 2) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 A. coerulea v3.1 15312   Chr_07: 43470187-43485498
Aqcoe6G109200 (1 of 2) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 A. coerulea v3.1 19532   Chr_06: 5877383-5896914
Kaladp0008s0267 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) K. fedtschenkoi v1.1 13278   Scaffold_8: 2315163-2328440
AL4G37670 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) A. lyrata v2.1 9055   scaffold_4: 19496684-19505738
Tp57577_TGAC_v2_gene25078 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) T. pratense v2 11665   Tp57577_TGAC_v2_LG2: 4710951-4722615
DCAR_022342 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) D. carota v2.0 13766   DCARv2_Chr6: 13903490-13917255
Solyc01g096390.2 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) S. lycopersicum ITAG2.4 23578   SL2.50ch01: 87475457-87499034

42 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g000291m C. sinensis v1.1 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
AT2G40030.1 A. thaliana TAIR10 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Brara.C02049.1.p B. rapa FPsc v1.3 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Kalax.0190s0018.1.p K. laxiflora v1.1 122786739 nuclear RNA polymerase D1B 2 5272 Eudicot
Aqcoe6G109200.1.p A. coerulea v3.1 122786739 nuclear RNA polymerase D1B 2 5272 Eudicot
Aqcoe7G443200.1.p A. coerulea v3.1 122786739 nuclear RNA polymerase D1B 2 5272 Eudicot
Kaladp0008s0267.1.p K. fedtschenkoi v1.1 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Tp57577_TGAC_v2_mRNA25935 T. pratense v2 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
DCAR_022342 D. carota v2.0 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Solyc01g096390.2.1 S. lycopersicum ITAG2.4 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
AUR62026863-RA C. quinoa v1.0 122786739 nuclear RNA polymerase D1B 2 5272 Eudicot
Phvul.011G206900.1.p P. vulgaris v2.1 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Lsat_1_v5_gn_7_31901.1 L. sativa V8 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Carub.0004s2219.1.p C. rubella v1.1 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
MD07G1039700 M. domestica v1.1 122786739 nuclear RNA polymerase D1B 2 5272 Eudicot
Ca_17988 C. arietinum v1.0 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
HanXRQChr01g0022531 H. annuus r1.2 122786739 nuclear RNA polymerase D1B 2 5272 Eudicot
HanXRQChr15g0481481 H. annuus r1.2 122786739 nuclear RNA polymerase D1B 2 5272 Eudicot
Cucsa.330520.1 C. sativus v1.0 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Thhalv10016128m E. salsugineum v1.0 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Ciclev10004129m C. clementina v1.0 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Lus10016332 L. usitatissimum v1.0 122786739 nuclear RNA polymerase D1B 2 5272 Eudicot
Lus10002748 L. usitatissimum v1.0 122786739 nuclear RNA polymerase D1B 2 5272 Eudicot
Gorai.010G216600.1 G. raimondii v2.1 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Thecc1EG045152t2 T. cacao v1.1 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Migut.B01227.1.p M. guttatus v2.0 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Araha.54531s0001.1.p A. halleri v1.1 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Cagra.2495s0018.1.p C. grandiflora v1.1 122786739 nuclear RNA polymerase D1B 1 5272 Eudicot
Glyma.13G196900.1.p G. max Wm82.a2.v1 122786739 nuclear RNA polymerase D1B 2 5272 Eudicot
Glyma.15G235900.1.p G. max Wm82.a2.v1 122786739 nuclear RNA polymerase D1B 2 5272 Eudicot