Gene : Eucgr.J01182 E. grandis v2.0
Defline:  (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 Genomic Order:  1043
Name:  ? Eucgr.J01182 Secondary Identifier:  ? PAC:32034421
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01182 0.5kb upstream 0.5kb upstream 14879 true Chr10: 12922880-12937758 Eucalyptus grandis
Eucgr.J01182 0.5kb upstream 0.5kb upstream 500 false Chr10: 12937259-12937758 Eucalyptus grandis
Eucgr.J01182 0.5kb downstream 0.5kb downstream 14879 true Chr10: 12922380-12937258 Eucalyptus grandis
Eucgr.J01182 0.5kb downstream 0.5kb downstream 500 false Chr10: 12922380-12922879 Eucalyptus grandis
Eucgr.J01182 1.0kb upstream 1.0kb upstream 15379 true Chr10: 12922880-12938258 Eucalyptus grandis
Eucgr.J01182 1.0kb upstream 1.0kb upstream 1000 false Chr10: 12937259-12938258 Eucalyptus grandis
Eucgr.J01182 1.0kb downstream 1.0kb downstream 15379 true Chr10: 12921880-12937258 Eucalyptus grandis
Eucgr.J01182 1.0kb downstream 1.0kb downstream 1000 false Chr10: 12921880-12922879 Eucalyptus grandis
Eucgr.J01182 2.0kb upstream 2.0kb upstream 16379 true Chr10: 12922880-12939258 Eucalyptus grandis
Eucgr.J01182 2.0kb upstream 2.0kb upstream 2000 false Chr10: 12937259-12939258 Eucalyptus grandis
Eucgr.J01182 2.0kb downstream 2.0kb downstream 16379 true Chr10: 12920880-12937258 Eucalyptus grandis
Eucgr.J01182 2.0kb downstream 2.0kb downstream 2000 false Chr10: 12920880-12922879 Eucalyptus grandis
Eucgr.J01182 5.0kb upstream 5.0kb upstream 19379 true Chr10: 12922880-12942258 Eucalyptus grandis
Eucgr.J01182 5.0kb upstream 5.0kb upstream 5000 false Chr10: 12937259-12942258 Eucalyptus grandis
Eucgr.J01182 5.0kb downstream 5.0kb downstream 19379 true Chr10: 12917880-12937258 Eucalyptus grandis
Eucgr.J01182 5.0kb downstream 5.0kb downstream 5000 false Chr10: 12917880-12922879 Eucalyptus grandis
Eucgr.J01182 10.0kb upstream 10.0kb upstream 24379 true Chr10: 12922880-12947258 Eucalyptus grandis
Eucgr.J01182 10.0kb upstream 10.0kb upstream 10000 false Chr10: 12937259-12947258 Eucalyptus grandis
Eucgr.J01182 10.0kb downstream 10.0kb downstream 24379 true Chr10: 12912880-12937258 Eucalyptus grandis
Eucgr.J01182 10.0kb downstream 10.0kb downstream 10000 false Chr10: 12912880-12922879 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050445 5270 Rosid View MSA
123745673 5271 Pentapetalae View MSA
122786739 5272 Eudicot View MSA
122051647 5273 Angiosperm View MSA
121348824 5274 Embryophyte View MSA
123381031 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.44753 0.0 18.6851   High
cufflinks 3.06615 0.0 6.95211    
cufflinks 6.62839 0.0 14.6639   High
cufflinks 3.47309 0.0 7.80636    
cufflinks 2.64886 0.0 6.0666    
cufflinks 2.98395 0.0 6.82034    

0 Strain