Gene : Thecc1EG045152 T. cacao v1.1
Defline:  (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) Genomic Order:  1549
Name:  ? Thecc1EG045152 Secondary Identifier:  ? PAC:27443915
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG045152 0.5kb upstream 0.5kb upstream 20621 true scaffold_10r: 22643178-22663798 Theobroma cacao
Thecc1EG045152 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 22663299-22663798 Theobroma cacao
Thecc1EG045152 0.5kb downstream 0.5kb downstream 20621 true scaffold_10r: 22642678-22663298 Theobroma cacao
Thecc1EG045152 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 22642678-22643177 Theobroma cacao
Thecc1EG045152 1.0kb upstream 1.0kb upstream 21121 true scaffold_10r: 22643178-22664298 Theobroma cacao
Thecc1EG045152 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 22663299-22664298 Theobroma cacao
Thecc1EG045152 1.0kb downstream 1.0kb downstream 21121 true scaffold_10r: 22642178-22663298 Theobroma cacao
Thecc1EG045152 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 22642178-22643177 Theobroma cacao
Thecc1EG045152 2.0kb upstream 2.0kb upstream 22121 true scaffold_10r: 22643178-22665298 Theobroma cacao
Thecc1EG045152 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 22663299-22665298 Theobroma cacao
Thecc1EG045152 2.0kb downstream 2.0kb downstream 22121 true scaffold_10r: 22641178-22663298 Theobroma cacao
Thecc1EG045152 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 22641178-22643177 Theobroma cacao
Thecc1EG045152 5.0kb upstream 5.0kb upstream 25121 true scaffold_10r: 22643178-22668298 Theobroma cacao
Thecc1EG045152 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 22663299-22668298 Theobroma cacao
Thecc1EG045152 5.0kb downstream 5.0kb downstream 25121 true scaffold_10r: 22638178-22663298 Theobroma cacao
Thecc1EG045152 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 22638178-22643177 Theobroma cacao
Thecc1EG045152 10.0kb upstream 10.0kb upstream 30121 true scaffold_10r: 22643178-22673298 Theobroma cacao
Thecc1EG045152 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 22663299-22673298 Theobroma cacao
Thecc1EG045152 10.0kb downstream 10.0kb downstream 30121 true scaffold_10r: 22633178-22663298 Theobroma cacao
Thecc1EG045152 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 22633178-22643177 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831307 5264 Brassicales-Malvales View MSA
124344169 5266 SBM View MSA
124237894 5268 Malvidae View MSA
124050445 5270 Rosid View MSA
123745673 5271 Pentapetalae View MSA
122786739 5272 Eudicot View MSA
122051647 5273 Angiosperm View MSA
121348824 5274 Embryophyte View MSA
123381031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain