Protein Family : nuclear RNA polymerase D1B 124237894

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  18

18 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g000291m.g (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 C. sinensis v1.1 13079   scaffold00139: 323616-336694
AT2G40030 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) A. thaliana TAIR10 NRPD1B 9090   Chr2: 16714494-16723583
Thhalv10016128m.g (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 E. salsugineum v1.0 8985   scaffold_10: 10564804-10573788
Ciclev10004129m.g (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 C. clementina v1.0 13345   scaffold_9: 12212755-12226099
Lus10002748.g (1 of 1) PF00623//PF04983//PF04997//PF04998//PF11523 - RNA polymerase Rpb1, domain 2 (RNA_pol_Rpb1_2) // RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 1 (RNA_pol_Rpb1_1) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // Protein of unknown function (DUF3223) (DUF3223) L. usitatissimum v1.0 10441   scaffold2896: 60656-71096
Lus10016332.g (1 of 1) PF04983//PF04998//PF11523 - RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // Protein of unknown function (DUF3223) (DUF3223) L. usitatissimum v1.0 6563   scaffold179: 74030-80592
Gorai.010G216600 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 G. raimondii v2.1 15584   Chr10: 58463706-58479289
Thecc1EG045152 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) T. cacao v1.1 20121   scaffold_10r: 22643178-22663298
Araha.54531s0001 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 A. halleri v1.1 7904   Scaffold54531: 3-7906
Cagra.2495s0018 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 C. grandiflora v1.1 9007   Scaffold2495: 62460-71466
Brara.C02049 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 B. rapa FPsc v1.3 9341   A03: 10199761-10209101
Bostr.23794s0061 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 B. stricta v1.2 9083   Scaffold23794: 297596-306678
SapurV1A.0009s1030 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) S. purpurea v1.0 15588   chr03: 15376229-15391816
Manes.04G159600 (1 of 1) PTHR19376:SF36 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 M. esculenta v6.1 17869   Chromosome04: 28156866-28174734
AL4G37670 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) A. lyrata v2.1 9055   scaffold_4: 19496684-19505738
Potri.003G196900 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) P. trichocarpa v3.1 15927   Chr03: 19960251-19976177
Podel.03G214600 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) P. deltoides WV94 v2.1 14448   Chr03: 20852546-20866993
Carub.0004s2219 (1 of 1) K16251 - DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] (NRPE1) C. rubella v1.1 8969   scaffold_4: 11845097-11854065

18 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g000291m C. sinensis v1.1 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
AT2G40030.1 A. thaliana TAIR10 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
Brara.C02049.1.p B. rapa FPsc v1.3 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
Carub.0004s2219.1.p C. rubella v1.1 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
Thhalv10016128m E. salsugineum v1.0 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
Ciclev10004129m C. clementina v1.0 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
Lus10002748 L. usitatissimum v1.0 124237894 nuclear RNA polymerase D1B 2 5268 Malvidae
Lus10016332 L. usitatissimum v1.0 124237894 nuclear RNA polymerase D1B 2 5268 Malvidae
Gorai.010G216600.1 G. raimondii v2.1 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
Thecc1EG045152t2 T. cacao v1.1 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
Araha.54531s0001.1.p A. halleri v1.1 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
Cagra.2495s0018.1.p C. grandiflora v1.1 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
Bostr.23794s0061.1.p B. stricta v1.2 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
SapurV1A.0009s1030.1.p S. purpurea v1.0 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
Manes.04G159600.1.p M. esculenta v6.1 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
AL4G37670.t1 A. lyrata v2.1 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
Potri.003G196900.2.p P. trichocarpa v3.1 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae
Podel.03G214600.1.p P. deltoides WV94 v2.1 124237894 nuclear RNA polymerase D1B 1 5268 Malvidae