Gene : Thecc1EG016168 T. cacao v1.1
Defline:  (1 of 1) K16250 - DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] (NRPD1) Genomic Order:  2668
Name:  ? Thecc1EG016168 Secondary Identifier:  ? PAC:27450764
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016168 0.5kb upstream 0.5kb upstream 16214 true scaffold_3: 31623992-31640205 Theobroma cacao
Thecc1EG016168 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31639706-31640205 Theobroma cacao
Thecc1EG016168 0.5kb downstream 0.5kb downstream 16214 true scaffold_3: 31623492-31639705 Theobroma cacao
Thecc1EG016168 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31623492-31623991 Theobroma cacao
Thecc1EG016168 1.0kb upstream 1.0kb upstream 16714 true scaffold_3: 31623992-31640705 Theobroma cacao
Thecc1EG016168 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31639706-31640705 Theobroma cacao
Thecc1EG016168 1.0kb downstream 1.0kb downstream 16714 true scaffold_3: 31622992-31639705 Theobroma cacao
Thecc1EG016168 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31622992-31623991 Theobroma cacao
Thecc1EG016168 2.0kb upstream 2.0kb upstream 17714 true scaffold_3: 31623992-31641705 Theobroma cacao
Thecc1EG016168 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31639706-31641705 Theobroma cacao
Thecc1EG016168 2.0kb downstream 2.0kb downstream 17714 true scaffold_3: 31621992-31639705 Theobroma cacao
Thecc1EG016168 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31621992-31623991 Theobroma cacao
Thecc1EG016168 5.0kb upstream 5.0kb upstream 20714 true scaffold_3: 31623992-31644705 Theobroma cacao
Thecc1EG016168 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31639706-31644705 Theobroma cacao
Thecc1EG016168 5.0kb downstream 5.0kb downstream 20714 true scaffold_3: 31618992-31639705 Theobroma cacao
Thecc1EG016168 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31618992-31623991 Theobroma cacao
Thecc1EG016168 10.0kb upstream 10.0kb upstream 25714 true scaffold_3: 31623992-31649705 Theobroma cacao
Thecc1EG016168 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31639706-31649705 Theobroma cacao
Thecc1EG016168 10.0kb downstream 10.0kb downstream 25714 true scaffold_3: 31613992-31639705 Theobroma cacao
Thecc1EG016168 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31613992-31623991 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828844 5264 Brassicales-Malvales View MSA
124337732 5266 SBM View MSA
124238381 5268 Malvidae View MSA
124061833 5270 Rosid View MSA
123751056 5271 Pentapetalae View MSA
122788895 5272 Eudicot View MSA
122051647 5273 Angiosperm View MSA
121348824 5274 Embryophyte View MSA
123381031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain