Gene : Glyma.11G026700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19376:SF40 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1 Genomic Order:  267
Name:  ? Glyma.11G026700 Secondary Identifier:  ? PAC:30529667
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G026700 0.5kb upstream 0.5kb upstream 15010 true Chr11: 1907884-1922893 Glycine max
Glyma.11G026700 0.5kb upstream 0.5kb upstream 500 false Chr11: 1907884-1908383 Glycine max
Glyma.11G026700 0.5kb downstream 0.5kb downstream 15010 true Chr11: 1908384-1923393 Glycine max
Glyma.11G026700 0.5kb downstream 0.5kb downstream 500 false Chr11: 1922894-1923393 Glycine max
Glyma.11G026700 1.0kb upstream 1.0kb upstream 15510 true Chr11: 1907384-1922893 Glycine max
Glyma.11G026700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1907384-1908383 Glycine max
Glyma.11G026700 1.0kb downstream 1.0kb downstream 15510 true Chr11: 1908384-1923893 Glycine max
Glyma.11G026700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1922894-1923893 Glycine max
Glyma.11G026700 2.0kb upstream 2.0kb upstream 16510 true Chr11: 1906384-1922893 Glycine max
Glyma.11G026700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1906384-1908383 Glycine max
Glyma.11G026700 2.0kb downstream 2.0kb downstream 16510 true Chr11: 1908384-1924893 Glycine max
Glyma.11G026700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1922894-1924893 Glycine max
Glyma.11G026700 5.0kb upstream 5.0kb upstream 19510 true Chr11: 1903384-1922893 Glycine max
Glyma.11G026700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1903384-1908383 Glycine max
Glyma.11G026700 5.0kb downstream 5.0kb downstream 19510 true Chr11: 1908384-1927893 Glycine max
Glyma.11G026700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1922894-1927893 Glycine max
Glyma.11G026700 10.0kb upstream 10.0kb upstream 24510 true Chr11: 1898384-1922893 Glycine max
Glyma.11G026700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1898384-1908383 Glycine max
Glyma.11G026700 10.0kb downstream 10.0kb downstream 24510 true Chr11: 1908384-1932893 Glycine max
Glyma.11G026700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1922894-1932893 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302362 5265 Fabidae View MSA
124061833 5270 Rosid View MSA
123751056 5271 Pentapetalae View MSA
122788895 5272 Eudicot View MSA
122051647 5273 Angiosperm View MSA
121348824 5274 Embryophyte View MSA
123381031 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.472167 0.0 2.94382   Low
cufflinks 3.67333 0.0 11.4465   High
cufflinks 1.41284 0.0 6.10878    
cufflinks 1.95632 0.0 6.69537    
cufflinks 1.63134 0.0 5.89433    
cufflinks 0.665191 0.0 2.38267   Low
cufflinks 3.07035 0.0 9.78664   High
cufflinks 1.25867 0.0 4.87655    
cufflinks 2.43385 0.0 10.3257    
cufflinks 0.252        
cufflinks 0.027     Low Low
cufflinks 0.384        
cufflinks 0.26        
cufflinks 0.288        
cufflinks 0.23        
cufflinks 0.148        
cufflinks 0.124        
cufflinks 0.526       High
cufflinks 0.942       High
cufflinks 0.097        
cufflinks 0.046     Low Low
cufflinks 0.12        
cufflinks 0.295        
cufflinks 0.049     Low Low
cufflinks 0.134        
cufflinks 0.086        

0 Strain