Protein : Carub.0006s1191.1.p C. rubella v1.1
UniProt Accession:  ? R0FET2 Secondary Identifier:  PAC:39248545
Organism Name:  Capsella rubella Length:  419  
Name:  Carub.0006s1191.1.p
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Proteins

8 Protein Domains

DB identifier Type Name
IPR011991 Domain Winged helix-turn-helix DNA-binding domain
IPR014284 Domain RNA polymerase sigma-70 like domain
IPR013324 Domain RNA polymerase sigma factor, region 3/4
IPR013325 Domain RNA polymerase sigma factor, region 2
IPR007627 Domain RNA polymerase sigma-70 region 2
IPR007630 Domain RNA polymerase sigma-70 region 4
IPR000943 Domain RNA polymerase sigma-70
IPR007624 Domain RNA polymerase sigma-70 region 3
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0006s1191.1_CDS 1260   scaffold_6: 4427840-4429608 Capsella rubella

25 Ontology Annotations

Ontology Term Db Gene/Protein Name
IPR007627 InterPro Carub.0006s1191.1.p
IPR007624 InterPro Carub.0006s1191.1.p
IPR000943 InterPro Carub.0006s1191.1.p
GO:0016987 GO Carub.0006s1191.1.p
IPR013325 InterPro Carub.0006s1191.1.p
IPR013324 InterPro Carub.0006s1191.1.p
IPR011991 InterPro Carub.0006s1191.1.p
IPR007630 InterPro Carub.0006s1191.1.p
G3DSA:1.10.601.10 GENE3D Carub.0006s1191.1.p
G3DSA:1.10.10.10 GENE3D Carub.0006s1191.1.p
GO:0006355 GO Carub.0006s1191.1.p
GO:0006352 GO Carub.0006s1191.1.p
GO:0003700 GO Carub.0006s1191.1.p
GO:0003677 GO Carub.0006s1191.1.p
R0FET2 UniProt Carub.0006s1191.1.p
TIGR02937 TIGRFAMs Carub.0006s1191.1.p
SSF88946 SSF Carub.0006s1191.1.p
PF04539 PFAM Carub.0006s1191.1.p
PTHR30603:SF24 PANTHER Carub.0006s1191.1.p
PTHR30603 PANTHER Carub.0006s1191.1.p
IPR014284 InterPro Carub.0006s1191.1.p
SSF88659 SSF Carub.0006s1191.1.p
PR00046 PRINTS Carub.0006s1191.1.p
PF04545 PFAM Carub.0006s1191.1.p
PF04542 PFAM Carub.0006s1191.1.p

0 Pathway Components

0 Pathways