Gene : Carub.0007s1176 C. rubella v1.1
Defline:  (1 of 3) PTHR14155//PTHR14155:SF95 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED Genomic Order:  1176
Name:  ? Carub.0007s1176 Secondary Identifier:  ? PAC:39232792
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1176 0.5kb upstream 0.5kb upstream 1926 true scaffold_7: 4479980-4481905 Capsella rubella
Carub.0007s1176 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4479980-4480479 Capsella rubella
Carub.0007s1176 0.5kb downstream 0.5kb downstream 1926 true scaffold_7: 4480480-4482405 Capsella rubella
Carub.0007s1176 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4481906-4482405 Capsella rubella
Carub.0007s1176 1.0kb upstream 1.0kb upstream 2426 true scaffold_7: 4479480-4481905 Capsella rubella
Carub.0007s1176 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4479480-4480479 Capsella rubella
Carub.0007s1176 1.0kb downstream 1.0kb downstream 2426 true scaffold_7: 4480480-4482905 Capsella rubella
Carub.0007s1176 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4481906-4482905 Capsella rubella
Carub.0007s1176 2.0kb upstream 2.0kb upstream 3426 true scaffold_7: 4478480-4481905 Capsella rubella
Carub.0007s1176 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4478480-4480479 Capsella rubella
Carub.0007s1176 2.0kb downstream 2.0kb downstream 3426 true scaffold_7: 4480480-4483905 Capsella rubella
Carub.0007s1176 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4481906-4483905 Capsella rubella
Carub.0007s1176 5.0kb upstream 5.0kb upstream 6426 true scaffold_7: 4475480-4481905 Capsella rubella
Carub.0007s1176 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4475480-4480479 Capsella rubella
Carub.0007s1176 5.0kb downstream 5.0kb downstream 6426 true scaffold_7: 4480480-4486905 Capsella rubella
Carub.0007s1176 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4481906-4486905 Capsella rubella
Carub.0007s1176 10.0kb upstream 10.0kb upstream 11426 true scaffold_7: 4470480-4481905 Capsella rubella
Carub.0007s1176 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4470480-4480479 Capsella rubella
Carub.0007s1176 10.0kb downstream 10.0kb downstream 11426 true scaffold_7: 4480480-4491905 Capsella rubella
Carub.0007s1176 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4481906-4491905 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369091 5261 Brassicaceae View MSA
123839327 5264 Brassicales-Malvales View MSA
124337844 5266 SBM View MSA
124251275 5268 Malvidae View MSA
124068292 5270 Rosid View MSA
123750856 5271 Pentapetalae View MSA
122796096 5272 Eudicot View MSA
122047388 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121346576 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain