Protein : Carub.0007s2317.1.p C. rubella v1.1
Secondary Identifier:  PAC:39234810 Organism Name:  Capsella rubella
Length:  424   Name:  Carub.0007s2317.1.p
Paste the following link
Quick Links:
SummaryProteinsOther
 
Quick Links:
SummaryProteinsOther
 

Ontology Annotation Displayer

Protein Family Displayer

Protein Feature Displayer

Proteins

4 Protein Domains

DB identifier Type Name
IPR012334 Domain Pectin lyase fold
IPR011050 Domain Pectin lyase fold/virulence factor
IPR006626 Repeat Parallel beta-helix repeat
IPR000743 Family Glycoside hydrolase, family 28
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0007s2317.1_CDS 1275   scaffold_7: 8746862-8748695 Capsella rubella

17 Ontology Annotations

Ontology Term Db Gene/Protein Name
RXN-2103 MetaCyc Carub.0007s2317.1.p
GALACTURAN-14-ALPHA-GALACTURONIDASE-RXN MetaCyc Carub.0007s2317.1.p
PTHR31375:SF11 PANTHER Carub.0007s2317.1.p
PTHR31375 PANTHER Carub.0007s2317.1.p
IPR006626 InterPro Carub.0007s2317.1.p
IPR000743 InterPro Carub.0007s2317.1.p
IPR012334 InterPro Carub.0007s2317.1.p
IPR011050 InterPro Carub.0007s2317.1.p
G3DSA:2.160.20.10 GENE3D Carub.0007s2317.1.p
3.2.1.67 ENZYME Carub.0007s2317.1.p
GO:0005975 GO Carub.0007s2317.1.p
GO:0004650 GO Carub.0007s2317.1.p
3.2.1.15 ENZYME Carub.0007s2317.1.p
PF00295 PFAM Carub.0007s2317.1.p
PWY-1081 Pathway Carub.0007s2317.1.p
SSF51126 SSF Carub.0007s2317.1.p
SM00710 SMART Carub.0007s2317.1.p

1 Pathway Components

Type Key Level Step
      7

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1081 Capsella rubella pathologic