Gene : Carub.0006s2539 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2539
Name:  ? Carub.0006s2539 Secondary Identifier:  ? PAC:39248572
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2539 0.5kb upstream 0.5kb upstream 2431 true scaffold_6: 9807260-9809690 Capsella rubella
Carub.0006s2539 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 9807260-9807759 Capsella rubella
Carub.0006s2539 0.5kb downstream 0.5kb downstream 2431 true scaffold_6: 9807760-9810190 Capsella rubella
Carub.0006s2539 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 9809691-9810190 Capsella rubella
Carub.0006s2539 1.0kb upstream 1.0kb upstream 2931 true scaffold_6: 9806760-9809690 Capsella rubella
Carub.0006s2539 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 9806760-9807759 Capsella rubella
Carub.0006s2539 1.0kb downstream 1.0kb downstream 2931 true scaffold_6: 9807760-9810690 Capsella rubella
Carub.0006s2539 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 9809691-9810690 Capsella rubella
Carub.0006s2539 2.0kb upstream 2.0kb upstream 3931 true scaffold_6: 9805760-9809690 Capsella rubella
Carub.0006s2539 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 9805760-9807759 Capsella rubella
Carub.0006s2539 2.0kb downstream 2.0kb downstream 3931 true scaffold_6: 9807760-9811690 Capsella rubella
Carub.0006s2539 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 9809691-9811690 Capsella rubella
Carub.0006s2539 5.0kb upstream 5.0kb upstream 6931 true scaffold_6: 9802760-9809690 Capsella rubella
Carub.0006s2539 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 9802760-9807759 Capsella rubella
Carub.0006s2539 5.0kb downstream 5.0kb downstream 6931 true scaffold_6: 9807760-9814690 Capsella rubella
Carub.0006s2539 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 9809691-9814690 Capsella rubella
Carub.0006s2539 10.0kb upstream 10.0kb upstream 11931 true scaffold_6: 9797760-9809690 Capsella rubella
Carub.0006s2539 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 9797760-9807759 Capsella rubella
Carub.0006s2539 10.0kb downstream 10.0kb downstream 11931 true scaffold_6: 9807760-9819690 Capsella rubella
Carub.0006s2539 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 9809691-9819690 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367390 5261 Brassicaceae View MSA
123827605 5264 Brassicales-Malvales View MSA
124343196 5266 SBM View MSA
124243845 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain