Protein : Carub.0006s2052.1.p C. rubella v1.1
UniProt Accession:  ? R0GSQ2 Secondary Identifier:  PAC:39248405
Organism Name:  Capsella rubella Length:  978  
Name:  Carub.0006s2052.1.p
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Proteins

9 Protein Domains

DB identifier Type Name
IPR002318 Family Alanine-tRNA ligase, class IIc
IPR003156 Domain DHHA1 domain
IPR018162 Domain Alanine-tRNA ligase, class IIc, anti-codon-binding domain
IPR013750 Domain GHMP kinase, C-terminal domain
IPR009000 Domain Translation protein, beta-barrel domain
IPR012947 Domain Threonyl/alanyl tRNA synthetase, SAD
IPR018163 Domain Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain
IPR018165 Domain Alanyl-tRNA synthetase, class IIc, core domain
IPR018164 Domain Alanyl-tRNA synthetase, class IIc, N-terminal
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0006s2052.1_CDS 2937   scaffold_6: 7632064-7636089 Capsella rubella

39 Ontology Annotations

Ontology Term Db Gene/Protein Name
PR00980 PRINTS Carub.0006s2052.1.p
PF07973 PFAM Carub.0006s2052.1.p
PF02272 PFAM Carub.0006s2052.1.p
PF01411 PFAM Carub.0006s2052.1.p
SSF50447 SSF Carub.0006s2052.1.p
SSF101353 SSF Carub.0006s2052.1.p
SM00863 SMART Carub.0006s2052.1.p
PS50860 PROFILE Carub.0006s2052.1.p
K01872 KEGG Carub.0006s2052.1.p
IPR018165 InterPro Carub.0006s2052.1.p
IPR018164 InterPro Carub.0006s2052.1.p
IPR018163 InterPro Carub.0006s2052.1.p
TRNA-CHARGING-PWY Pathway Carub.0006s2052.1.p
PTHR11777:SF14 PANTHER Carub.0006s2052.1.p
PTHR11777 PANTHER Carub.0006s2052.1.p
ALANINE--TRNA-LIGASE-RXN MetaCyc Carub.0006s2052.1.p
TIGR00344 TIGRFAMs Carub.0006s2052.1.p
SSF55681 SSF Carub.0006s2052.1.p
SSF55186 SSF Carub.0006s2052.1.p
R0GSQ2 UniProt Carub.0006s2052.1.p
G3DSA:3.30.70.890 GENE3D Carub.0006s2052.1.p
G3DSA:2.40.30.10 GENE3D Carub.0006s2052.1.p
6.1.1.7 ENZYME Carub.0006s2052.1.p
IPR003156 InterPro Carub.0006s2052.1.p
IPR002318 InterPro Carub.0006s2052.1.p
GO:0043039 GO Carub.0006s2052.1.p
GO:0016876 GO Carub.0006s2052.1.p
IPR018162 InterPro Carub.0006s2052.1.p
IPR013750 InterPro Carub.0006s2052.1.p
IPR012947 InterPro Carub.0006s2052.1.p

1 Pathway Components

Type Key Level Step
      84

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella TRNA-CHARGING-PWY Capsella rubella pathologic