Protein : Carub.0003s2734.1.p C. rubella v1.1

Secondary Identifier:  PAC:39239421 Organism Name:  Capsella rubella
Length:  990   Name:  Carub.0003s2734.1.p
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Proteins

8 Protein Domains

DB identifier Type Name
IPR014001 Domain Helicase superfamily 1/2, ATP-binding domain
IPR027417 Domain P-loop containing nucleoside triphosphate hydrolase
IPR001650 Domain Helicase, C-terminal
IPR011545 Domain DEAD/DEAH box helicase domain
IPR025696 Domain rRNA-processing arch domain
IPR012961 Domain ATP-dependent RNA helicase Ski2, C-terminal
IPR007010 Domain Poly(A) polymerase, RNA-binding domain
IPR016438 Family ATP-dependent RNA helicase Ski2
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0003s2734.1_CDS 2973   scaffold_3: 10491372-10497146 Capsella rubella

27 Ontology Annotations

Ontology Term Db Gene/Protein Name
K12598 KEGG Carub.0003s2734.1.p
IPR027417 InterPro Carub.0003s2734.1.p
IPR025696 InterPro Carub.0003s2734.1.p
IPR016438 InterPro Carub.0003s2734.1.p
IPR014001 InterPro Carub.0003s2734.1.p
IPR012961 InterPro Carub.0003s2734.1.p
IPR011545 InterPro Carub.0003s2734.1.p
IPR007010 InterPro Carub.0003s2734.1.p
SM00490 SMART Carub.0003s2734.1.p
PS51194 PROFILE Carub.0003s2734.1.p
PS51192 PROFILE Carub.0003s2734.1.p
PIRSF005198 PIRSF Carub.0003s2734.1.p
PF13234 PFAM Carub.0003s2734.1.p
PF08148 PFAM Carub.0003s2734.1.p
PF00271 PFAM Carub.0003s2734.1.p
PF00270 PFAM Carub.0003s2734.1.p
SSF52540 SSF Carub.0003s2734.1.p
G3DSA:3.30.70.590 GENE3D Carub.0003s2734.1.p
3.6.4.13 ENZYME Carub.0003s2734.1.p
IPR001650 InterPro Carub.0003s2734.1.p
GO:0043631 GO Carub.0003s2734.1.p
GO:0006401 GO Carub.0003s2734.1.p
GO:0005524 GO Carub.0003s2734.1.p
GO:0003724 GO Carub.0003s2734.1.p
GO:0003723 GO Carub.0003s2734.1.p
GO:0003676 GO Carub.0003s2734.1.p
G3DSA:3.40.50.300 GENE3D Carub.0003s2734.1.p

0 Pathway Components

0 Pathways