Gene : Carub.0003s1972 C. rubella v1.1
Defline:  (1 of 1) K12824 - transcription elongation regulator 1 (TCERG1, CA150) Genomic Order:  1972
Name:  ? Carub.0003s1972 Secondary Identifier:  ? PAC:39241664
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1972 0.5kb upstream 0.5kb upstream 6178 true scaffold_3: 7068242-7074419 Capsella rubella
Carub.0003s1972 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7068242-7068741 Capsella rubella
Carub.0003s1972 0.5kb downstream 0.5kb downstream 6178 true scaffold_3: 7068742-7074919 Capsella rubella
Carub.0003s1972 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7074420-7074919 Capsella rubella
Carub.0003s1972 1.0kb upstream 1.0kb upstream 6678 true scaffold_3: 7067742-7074419 Capsella rubella
Carub.0003s1972 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7067742-7068741 Capsella rubella
Carub.0003s1972 1.0kb downstream 1.0kb downstream 6678 true scaffold_3: 7068742-7075419 Capsella rubella
Carub.0003s1972 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7074420-7075419 Capsella rubella
Carub.0003s1972 2.0kb upstream 2.0kb upstream 7678 true scaffold_3: 7066742-7074419 Capsella rubella
Carub.0003s1972 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7066742-7068741 Capsella rubella
Carub.0003s1972 2.0kb downstream 2.0kb downstream 7678 true scaffold_3: 7068742-7076419 Capsella rubella
Carub.0003s1972 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7074420-7076419 Capsella rubella
Carub.0003s1972 5.0kb upstream 5.0kb upstream 10678 true scaffold_3: 7063742-7074419 Capsella rubella
Carub.0003s1972 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7063742-7068741 Capsella rubella
Carub.0003s1972 5.0kb downstream 5.0kb downstream 10678 true scaffold_3: 7068742-7079419 Capsella rubella
Carub.0003s1972 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7074420-7079419 Capsella rubella
Carub.0003s1972 10.0kb upstream 10.0kb upstream 15678 true scaffold_3: 7058742-7074419 Capsella rubella
Carub.0003s1972 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7058742-7068741 Capsella rubella
Carub.0003s1972 10.0kb downstream 10.0kb downstream 15678 true scaffold_3: 7068742-7084419 Capsella rubella
Carub.0003s1972 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7074420-7084419 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370713 5261 Brassicaceae View MSA
123827635 5264 Brassicales-Malvales View MSA
124343443 5266 SBM View MSA
124249754 5268 Malvidae View MSA
124068165 5270 Rosid View MSA
123739157 5271 Pentapetalae View MSA
122793255 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain