Protein Family : pre-mRNA-processing protein 40A 122049454

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  168

168 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29958.t000001 (1 of 1) K12824 - transcription elongation regulator 1 (TCERG1, CA150) R. communis v0.1 17339   29958: 247158-264496
30099.t000079 (1 of 1) PTHR11864//PTHR11864:SF21 - PRE-MRNA-PROCESSING PROTEIN PRP40 // SUBFAMILY NOT NAMED R. communis v0.1 12566   30099: 382727-395292
30170.t000088 (1 of 1) PTHR11864//PTHR11864:SF0 - PRE-MRNA-PROCESSING PROTEIN PRP40 // PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST) R. communis v0.1 8914   30170: 503445-512358
Cucsa.353020 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. sativus v1.0 12561   scaffold03533: 648933-661493
Cucsa.298480 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. sativus v1.0 16220   scaffold02901: 97149-113368
Cucsa.359490 (1 of 1) PTHR15377 - TRANSCRIPTION FACTOR CA150B RELATED - TCERG1 C. sativus v1.0 11800   scaffold03588: 388903-400702
orange1.1g002026m.g (1 of 1) PTHR15377 - TRANSCRIPTION FACTOR CA150B RELATED - TCERG1 C. sinensis v1.1 13165   scaffold00151: 206126-219290
orange1.1g001878m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. sinensis v1.1 10665   scaffold00236: 126725-137389
orange1.1g001687m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. sinensis v1.1 12275   scaffold00236: 138995-151269
AT3G19840 (1 of 1) K12824 - transcription elongation regulator 1 (TCERG1, CA150) A. thaliana TAIR10 PRP40C 6271   Chr3: 6891086-6897356
AT3G19670 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) A. thaliana TAIR10 PRP40B 8521   Chr3: 6828062-6836582
AT1G44910 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) A. thaliana TAIR10 PRP40A 7362   Chr1: 16975604-16982965
Thhalv10019995m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 E. salsugineum v1.0 8408   scaffold_13: 2389397-2397804
Thhalv10020134m.g (1 of 1) PTHR15377 - TRANSCRIPTION FACTOR CA150B RELATED - TCERG1 E. salsugineum v1.0 5705   scaffold_13: 2317185-2322889
Thhalv10011212m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 E. salsugineum v1.0 7898   scaffold_7: 10903077-10910974
Ciclev10027732m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. clementina v1.0 12304   scaffold_8: 1736191-1748494
Ciclev10027741m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. clementina v1.0 13214   scaffold_8: 1721093-1734306
Ciclev10030612m.g (1 of 1) PTHR15377 - TRANSCRIPTION FACTOR CA150B RELATED - TCERG1 C. clementina v1.0 13158   scaffold_4: 18277366-18290523
Lus10012908.g (1 of 2) PTHR15377 - TRANSCRIPTION FACTOR CA150B RELATED - TCERG1 L. usitatissimum v1.0 4573   scaffold1313: 457451-462023
Lus10006142.g (1 of 2) PTHR11864//PTHR11864:SF21 - PRE-MRNA-PROCESSING PROTEIN PRP40 L. usitatissimum v1.0 13384   scaffold141: 164629-178012
Lus10033770.g (1 of 2) PTHR11864//PTHR11864:SF21 - PRE-MRNA-PROCESSING PROTEIN PRP40 L. usitatissimum v1.0 7104   scaffold222: 79433-86536
Lus10018659.g (1 of 2) PTHR11864:SF0 - PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST) L. usitatissimum v1.0 9114   scaffold461: 53907-63020
Lus10030562.g (1 of 2) PTHR15377 - TRANSCRIPTION FACTOR CA150B RELATED - TCERG1 L. usitatissimum v1.0 5129   scaffold917: 707217-712345
Lus10007723.g (1 of 2) PTHR11864:SF0 - PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST) L. usitatissimum v1.0 8675   scaffold993: 63876-72550
Gorai.002G167700 (1 of 1) PTHR15377 - TRANSCRIPTION FACTOR CA150B RELATED - TCERG1 G. raimondii v2.1 14931   Chr02: 41577286-41592216
Gorai.012G147100 (1 of 1) PTHR11864//PTHR11864:SF21 - PRE-MRNA-PROCESSING PROTEIN PRP40 G. raimondii v2.1 13595   Chr12: 32114790-32128384
Gorai.010G027200 (1 of 1) PTHR11864:SF0 - PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST) G. raimondii v2.1 10603   Chr10: 2185983-2196585
Thecc1EG007259 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) T. cacao v1.1 13943   scaffold_2: 6036650-6050592
Thecc1EG011085 (1 of 1) K12824 - transcription elongation regulator 1 (TCERG1, CA150) T. cacao v1.1 16553   scaffold_2: 37884231-37900783
Thecc1EG034659 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) T. cacao v1.1 11174   scaffold_8: 4176141-4187314

168 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29958.m000931 R. communis v0.1 122049454 pre-mRNA-processing protein 40A 3 5273 Angiosperm
orange1.1g002026m C. sinensis v1.1 122049454 pre-mRNA-processing protein 40A 3 5273 Angiosperm
Thhalv10011212m E. salsugineum v1.0 122049454 pre-mRNA-processing protein 40A 3 5273 Angiosperm
Lus10007723 L. usitatissimum v1.0 122049454 pre-mRNA-processing protein 40A 6 5273 Angiosperm
Lus10006142 L. usitatissimum v1.0 122049454 pre-mRNA-processing protein 40A 6 5273 Angiosperm
Gorai.002G167700.1 G. raimondii v2.1 122049454 pre-mRNA-processing protein 40A 3 5273 Angiosperm
Gorai.012G147100.1 G. raimondii v2.1 122049454 pre-mRNA-processing protein 40A 3 5273 Angiosperm
Thecc1EG011085t1 T. cacao v1.1 122049454 pre-mRNA-processing protein 40A 3 5273 Angiosperm
Araha.3986s0001.1.p A. halleri v1.1 122049454 pre-mRNA-processing protein 40A 2 5273 Angiosperm
Migut.N01126.1.p M. guttatus v2.0 122049454 pre-mRNA-processing protein 40A 3 5273 Angiosperm
Glyma.20G135800.1.p G. max Wm82.a2.v1 122049454 pre-mRNA-processing protein 40A 7 5273 Angiosperm
Glyma.12G028100.1.p G. max Wm82.a2.v1 122049454 pre-mRNA-processing protein 40A 7 5273 Angiosperm
Brara.J00586.1.p B. rapa FPsc v1.3 122049454 pre-mRNA-processing protein 40A 3 5273 Angiosperm
Bostr.19424s0693.1.p B. stricta v1.2 122049454 pre-mRNA-processing protein 40A 3 5273 Angiosperm
Bostr.12302s0099.1.p B. stricta v1.2 122049454 pre-mRNA-processing protein 40A 3 5273 Angiosperm
Medtr1g106025.1 M. truncatula Mt4.0v1 122049454 pre-mRNA-processing protein 40A 3 5273 Angiosperm
SapurV1A.0611s0160.1.p S. purpurea v1.0 122049454 pre-mRNA-processing protein 40A 4 5273 Angiosperm
SapurV1A.0458s0340.1.p S. purpurea v1.0 122049454 pre-mRNA-processing protein 40A 4 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00029.99 A. trichopoda v1.0 122049454 pre-mRNA-processing protein 40A 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00010.255 A. trichopoda v1.0 122049454 pre-mRNA-processing protein 40A 2 5273 Angiosperm
Traes_1DL_6B2D8E6E9.1 T. aestivum v2.2 122049454 pre-mRNA-processing protein 40A 2 5273 Angiosperm
Traes_1AL_CD9408167.1 T. aestivum v2.2 122049454 pre-mRNA-processing protein 40A 2 5273 Angiosperm
GSMUA_AchrUn_randomP23130_001 M. acuminata v1 122049454 pre-mRNA-processing protein 40A 2 5273 Angiosperm
GSMUA_Achr1P10610_001 M. acuminata v1 122049454 pre-mRNA-processing protein 40A 2 5273 Angiosperm
Manes.03G080900.1.p M. esculenta v6.1 122049454 pre-mRNA-processing protein 40A 3 5273 Angiosperm
Kalax.0159s0073.1.p K. laxiflora v1.1 122049454 pre-mRNA-processing protein 40A 5 5273 Angiosperm
Kalax.0303s0032.1.p K. laxiflora v1.1 122049454 pre-mRNA-processing protein 40A 5 5273 Angiosperm
Kalax.0002s0133.1.p K. laxiflora v1.1 122049454 pre-mRNA-processing protein 40A 5 5273 Angiosperm
Seita.9G215900.1.p S. italica v2.2 122049454 pre-mRNA-processing protein 40A 2 5273 Angiosperm
Bradi1g37130.3.p B. distachyon v3.1 122049454 pre-mRNA-processing protein 40A 2 5273 Angiosperm