Gene : Cucsa.353020 C. sativus v1.0
Defline:  (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 Genomic Order:  96
Name:  ? Cucsa.353020 Secondary Identifier:  ? PAC:16980097
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.353020 0.5kb upstream 0.5kb upstream 13061 true scaffold03533: 648933-661993 Cucumis sativus
Cucsa.353020 0.5kb upstream 0.5kb upstream 500 false scaffold03533: 661494-661993 Cucumis sativus
Cucsa.353020 0.5kb downstream 0.5kb downstream 13061 true scaffold03533: 648433-661493 Cucumis sativus
Cucsa.353020 0.5kb downstream 0.5kb downstream 500 false scaffold03533: 648433-648932 Cucumis sativus
Cucsa.353020 1.0kb upstream 1.0kb upstream 13561 true scaffold03533: 648933-662493 Cucumis sativus
Cucsa.353020 1.0kb upstream 1.0kb upstream 1000 false scaffold03533: 661494-662493 Cucumis sativus
Cucsa.353020 1.0kb downstream 1.0kb downstream 13561 true scaffold03533: 647933-661493 Cucumis sativus
Cucsa.353020 1.0kb downstream 1.0kb downstream 1000 false scaffold03533: 647933-648932 Cucumis sativus
Cucsa.353020 2.0kb upstream 2.0kb upstream 14561 true scaffold03533: 648933-663493 Cucumis sativus
Cucsa.353020 2.0kb upstream 2.0kb upstream 2000 false scaffold03533: 661494-663493 Cucumis sativus
Cucsa.353020 2.0kb downstream 2.0kb downstream 14561 true scaffold03533: 646933-661493 Cucumis sativus
Cucsa.353020 2.0kb downstream 2.0kb downstream 2000 false scaffold03533: 646933-648932 Cucumis sativus
Cucsa.353020 5.0kb upstream 5.0kb upstream 17561 true scaffold03533: 648933-666493 Cucumis sativus
Cucsa.353020 5.0kb upstream 5.0kb upstream 5000 false scaffold03533: 661494-666493 Cucumis sativus
Cucsa.353020 5.0kb downstream 5.0kb downstream 17561 true scaffold03533: 643933-661493 Cucumis sativus
Cucsa.353020 5.0kb downstream 5.0kb downstream 5000 false scaffold03533: 643933-648932 Cucumis sativus
Cucsa.353020 10.0kb upstream 10.0kb upstream 22561 true scaffold03533: 648933-671493 Cucumis sativus
Cucsa.353020 10.0kb upstream 10.0kb upstream 10000 false scaffold03533: 661494-671493 Cucumis sativus
Cucsa.353020 10.0kb downstream 10.0kb downstream 22561 true scaffold03533: 638933-661493 Cucumis sativus
Cucsa.353020 10.0kb downstream 10.0kb downstream 10000 false scaffold03533: 638933-648932 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303308 5265 Fabidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain