Gene : Thecc1EG034659 T. cacao v1.1
Defline:  (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) Genomic Order:  814
Name:  ? Thecc1EG034659 Secondary Identifier:  ? PAC:27456679
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034659 0.5kb upstream 0.5kb upstream 11674 true scaffold_8: 4175641-4187314 Theobroma cacao
Thecc1EG034659 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4175641-4176140 Theobroma cacao
Thecc1EG034659 0.5kb downstream 0.5kb downstream 11674 true scaffold_8: 4176141-4187814 Theobroma cacao
Thecc1EG034659 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4187315-4187814 Theobroma cacao
Thecc1EG034659 1.0kb upstream 1.0kb upstream 12174 true scaffold_8: 4175141-4187314 Theobroma cacao
Thecc1EG034659 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4175141-4176140 Theobroma cacao
Thecc1EG034659 1.0kb downstream 1.0kb downstream 12174 true scaffold_8: 4176141-4188314 Theobroma cacao
Thecc1EG034659 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4187315-4188314 Theobroma cacao
Thecc1EG034659 2.0kb upstream 2.0kb upstream 13174 true scaffold_8: 4174141-4187314 Theobroma cacao
Thecc1EG034659 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4174141-4176140 Theobroma cacao
Thecc1EG034659 2.0kb downstream 2.0kb downstream 13174 true scaffold_8: 4176141-4189314 Theobroma cacao
Thecc1EG034659 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4187315-4189314 Theobroma cacao
Thecc1EG034659 5.0kb upstream 5.0kb upstream 16174 true scaffold_8: 4171141-4187314 Theobroma cacao
Thecc1EG034659 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4171141-4176140 Theobroma cacao
Thecc1EG034659 5.0kb downstream 5.0kb downstream 16174 true scaffold_8: 4176141-4192314 Theobroma cacao
Thecc1EG034659 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4187315-4192314 Theobroma cacao
Thecc1EG034659 10.0kb upstream 10.0kb upstream 21174 true scaffold_8: 4166141-4187314 Theobroma cacao
Thecc1EG034659 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4166141-4176140 Theobroma cacao
Thecc1EG034659 10.0kb downstream 10.0kb downstream 21174 true scaffold_8: 4176141-4197314 Theobroma cacao
Thecc1EG034659 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4187315-4197314 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833261 5264 Brassicales-Malvales View MSA
124350804 5266 SBM View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain