Protein Family : pre-mRNA-processing protein 40B 124350804

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  23

23 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g001878m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. sinensis v1.1 10665   scaffold00236: 126725-137389
orange1.1g001687m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. sinensis v1.1 12275   scaffold00236: 138995-151269
AT3G19670 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) A. thaliana TAIR10 PRP40B 8521   Chr3: 6828062-6836582
AT1G44910 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) A. thaliana TAIR10 PRP40A 7362   Chr1: 16975604-16982965
Thhalv10019995m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 E. salsugineum v1.0 8408   scaffold_13: 2389397-2397804
Thhalv10011212m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 E. salsugineum v1.0 7898   scaffold_7: 10903077-10910974
Ciclev10027732m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. clementina v1.0 12304   scaffold_8: 1736191-1748494
Ciclev10027741m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. clementina v1.0 13214   scaffold_8: 1721093-1734306
Gorai.012G147100 (1 of 1) PTHR11864//PTHR11864:SF21 - PRE-MRNA-PROCESSING PROTEIN PRP40 G. raimondii v2.1 13595   Chr12: 32114790-32128384
Gorai.010G027200 (1 of 1) PTHR11864:SF0 - PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST) G. raimondii v2.1 10603   Chr10: 2185983-2196585
Thecc1EG007259 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) T. cacao v1.1 13943   scaffold_2: 6036650-6050592
Thecc1EG034659 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) T. cacao v1.1 11174   scaffold_8: 4176141-4187314
Araha.3986s0001 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 A. halleri v1.1 6638   Scaffold3986: 988-7625
Cagra.6943s0018 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. grandiflora v1.1 8336   Scaffold6943: 60186-68521
Cagra.18800s0002 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. grandiflora v1.1 7521   Scaffold18800: 1129-8649
Brara.E02240 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 B. rapa FPsc v1.3 8446   A05: 20446960-20455405
Brara.J00586 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 B. rapa FPsc v1.3 7513   A10: 4350378-4357890
Bostr.12302s0099 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 B. stricta v1.2 8506   Scaffold12302: 1539692-1548197
Bostr.19424s0693 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 B. stricta v1.2 9816   Scaffold19424: 5350655-5360470
AL1G52580 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) A. lyrata v2.1 7585   scaffold_1: 22922516-22930100
AL3G33120 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) A. lyrata v2.1 9194   scaffold_3: 8503058-8512251
Carub.0001s3541 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) C. rubella v1.1 8150   scaffold_1: 15434439-15442588
Carub.0003s1955 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) C. rubella v1.1 9480   scaffold_3: 7001099-7010578

23 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10011212m E. salsugineum v1.0 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Gorai.012G147100.1 G. raimondii v2.1 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Brara.J00586.1.p B. rapa FPsc v1.3 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Bostr.19424s0693.1.p B. stricta v1.2 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Bostr.12302s0099.1.p B. stricta v1.2 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
AL1G52580.t1 A. lyrata v2.1 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Carub.0003s1955.1.p C. rubella v1.1 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
orange1.1g001878m C. sinensis v1.1 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
orange1.1g001687m C. sinensis v1.1 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
AT3G19670.1 A. thaliana TAIR10 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
AT1G44910.1 A. thaliana TAIR10 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Thhalv10019995m E. salsugineum v1.0 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Ciclev10027732m C. clementina v1.0 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Ciclev10027741m C. clementina v1.0 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Gorai.010G027200.1 G. raimondii v2.1 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Thecc1EG007259t1 T. cacao v1.1 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Thecc1EG034659t3 T. cacao v1.1 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Araha.3986s0001.1.p A. halleri v1.1 124350804 pre-mRNA-processing protein 40B 1 5266 SBM
Cagra.6943s0018.1.p C. grandiflora v1.1 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Cagra.18800s0002.1.p C. grandiflora v1.1 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Brara.E02240.1.p B. rapa FPsc v1.3 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
AL3G33120.t1 A. lyrata v2.1 124350804 pre-mRNA-processing protein 40B 2 5266 SBM
Carub.0001s3541.1.p C. rubella v1.1 124350804 pre-mRNA-processing protein 40B 2 5266 SBM