Gene : Araha.3986s0001 A. halleri v1.1
Defline:  (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 Genomic Order:  1
Name:  ? Araha.3986s0001 Secondary Identifier:  ? PAC:28854196
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3986s0001 0.5kb upstream 0.5kb upstream 7138 true Scaffold3986: 988-8125 Arabidopsis halleri
Araha.3986s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3986: 7626-8125 Arabidopsis halleri
Araha.3986s0001 0.5kb downstream 0.5kb downstream 7138 true Scaffold3986: 488-7625 Arabidopsis halleri
Araha.3986s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3986: 488-987 Arabidopsis halleri
Araha.3986s0001 1.0kb upstream 1.0kb upstream 7638 true Scaffold3986: 988-8625 Arabidopsis halleri
Araha.3986s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold3986: 7626-8625 Arabidopsis halleri
Araha.3986s0001 1.0kb downstream 1.0kb downstream 7625 true Scaffold3986: 1-7625 Arabidopsis halleri
Araha.3986s0001 1.0kb downstream 1.0kb downstream 987 false Scaffold3986: 1-987 Arabidopsis halleri
Araha.3986s0001 2.0kb upstream 2.0kb upstream 8638 true Scaffold3986: 988-9625 Arabidopsis halleri
Araha.3986s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold3986: 7626-9625 Arabidopsis halleri
Araha.3986s0001 2.0kb downstream 2.0kb downstream 7625 true Scaffold3986: 1-7625 Arabidopsis halleri
Araha.3986s0001 2.0kb downstream 2.0kb downstream 987 false Scaffold3986: 1-987 Arabidopsis halleri
Araha.3986s0001 5.0kb upstream 5.0kb upstream 11638 true Scaffold3986: 988-12625 Arabidopsis halleri
Araha.3986s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold3986: 7626-12625 Arabidopsis halleri
Araha.3986s0001 5.0kb downstream 5.0kb downstream 7625 true Scaffold3986: 1-7625 Arabidopsis halleri
Araha.3986s0001 5.0kb downstream 5.0kb downstream 987 false Scaffold3986: 1-987 Arabidopsis halleri
Araha.3986s0001 10.0kb upstream 10.0kb upstream 15835 true Scaffold3986: 988-16822 Arabidopsis halleri
Araha.3986s0001 10.0kb upstream 10.0kb upstream 9197 false Scaffold3986: 7626-16822 Arabidopsis halleri
Araha.3986s0001 10.0kb downstream 10.0kb downstream 7625 true Scaffold3986: 1-7625 Arabidopsis halleri
Araha.3986s0001 10.0kb downstream 10.0kb downstream 987 false Scaffold3986: 1-987 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369990 5261 Brassicaceae View MSA
123833261 5264 Brassicales-Malvales View MSA
124350804 5266 SBM View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain