Protein Family : pre-mRNA-processing protein 40B 124245383

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  40

40 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30099.t000079 (1 of 1) PTHR11864//PTHR11864:SF21 - PRE-MRNA-PROCESSING PROTEIN PRP40 // SUBFAMILY NOT NAMED R. communis v0.1 12566   30099: 382727-395292
30170.t000088 (1 of 1) PTHR11864//PTHR11864:SF0 - PRE-MRNA-PROCESSING PROTEIN PRP40 // PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST) R. communis v0.1 8914   30170: 503445-512358
orange1.1g001878m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. sinensis v1.1 10665   scaffold00236: 126725-137389
orange1.1g001687m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. sinensis v1.1 12275   scaffold00236: 138995-151269
AT3G19670 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) A. thaliana TAIR10 PRP40B 8521   Chr3: 6828062-6836582
AT1G44910 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) A. thaliana TAIR10 PRP40A 7362   Chr1: 16975604-16982965
Thhalv10019995m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 E. salsugineum v1.0 8408   scaffold_13: 2389397-2397804
Thhalv10011212m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 E. salsugineum v1.0 7898   scaffold_7: 10903077-10910974
Ciclev10027732m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. clementina v1.0 12304   scaffold_8: 1736191-1748494
Ciclev10027741m.g (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. clementina v1.0 13214   scaffold_8: 1721093-1734306
Lus10006142.g (1 of 2) PTHR11864//PTHR11864:SF21 - PRE-MRNA-PROCESSING PROTEIN PRP40 L. usitatissimum v1.0 13384   scaffold141: 164629-178012
Lus10033770.g (1 of 2) PTHR11864//PTHR11864:SF21 - PRE-MRNA-PROCESSING PROTEIN PRP40 L. usitatissimum v1.0 7104   scaffold222: 79433-86536
Lus10018659.g (1 of 2) PTHR11864:SF0 - PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST) L. usitatissimum v1.0 9114   scaffold461: 53907-63020
Lus10007723.g (1 of 2) PTHR11864:SF0 - PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST) L. usitatissimum v1.0 8675   scaffold993: 63876-72550
Gorai.012G147100 (1 of 1) PTHR11864//PTHR11864:SF21 - PRE-MRNA-PROCESSING PROTEIN PRP40 G. raimondii v2.1 13595   Chr12: 32114790-32128384
Gorai.010G027200 (1 of 1) PTHR11864:SF0 - PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST) G. raimondii v2.1 10603   Chr10: 2185983-2196585
Thecc1EG007259 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) T. cacao v1.1 13943   scaffold_2: 6036650-6050592
Thecc1EG034659 (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) T. cacao v1.1 11174   scaffold_8: 4176141-4187314
Araha.3986s0001 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 A. halleri v1.1 6638   Scaffold3986: 988-7625
Cagra.6943s0018 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. grandiflora v1.1 8336   Scaffold6943: 60186-68521
Cagra.18800s0002 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 C. grandiflora v1.1 7521   Scaffold18800: 1129-8649
Brara.E02240 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 B. rapa FPsc v1.3 8446   A05: 20446960-20455405
Brara.J00586 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 B. rapa FPsc v1.3 7513   A10: 4350378-4357890
Bostr.12302s0099 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 B. stricta v1.2 8506   Scaffold12302: 1539692-1548197
Bostr.19424s0693 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 B. stricta v1.2 9816   Scaffold19424: 5350655-5360470
SapurV1A.0611s0160 (1 of 1) PTHR11864//PTHR11864:SF0 - PRE-MRNA-PROCESSING PROTEIN PRP40 // PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST) S. purpurea v1.0 16425   chr14: 488178-504602
SapurV1A.0019s0600 (1 of 3) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) S. purpurea v1.0 14657   chr09: 6664351-6679007
SapurV1A.0005s0110 (1 of 3) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) S. purpurea v1.0 13510   chr16: 17079771-17093280
Manes.10G086900 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 M. esculenta v6.1 19127   Chromosome10: 17871902-17891028
Manes.18G049300 (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 M. esculenta v6.1 12174   Chromosome18: 4125893-4138066

40 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10011212m E. salsugineum v1.0 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
Lus10007723 L. usitatissimum v1.0 124245383 pre-mRNA-processing protein 40B 4 5268 Malvidae
Lus10006142 L. usitatissimum v1.0 124245383 pre-mRNA-processing protein 40B 4 5268 Malvidae
Gorai.012G147100.1 G. raimondii v2.1 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
Brara.J00586.1.p B. rapa FPsc v1.3 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
Bostr.19424s0693.1.p B. stricta v1.2 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
Bostr.12302s0099.1.p B. stricta v1.2 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
SapurV1A.0611s0160.1.p S. purpurea v1.0 124245383 pre-mRNA-processing protein 40B 3 5268 Malvidae
AL1G52580.t1 A. lyrata v2.1 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
Potri.009G085400.4.p P. trichocarpa v3.1 124245383 pre-mRNA-processing protein 40B 3 5268 Malvidae
Potri.014G013100.2.p P. trichocarpa v3.1 124245383 pre-mRNA-processing protein 40B 3 5268 Malvidae
Potri.001G289800.1.p P. trichocarpa v3.1 124245383 pre-mRNA-processing protein 40B 3 5268 Malvidae
Podel.14G012400.1.p P. deltoides WV94 v2.1 124245383 pre-mRNA-processing protein 40B 3 5268 Malvidae
Carub.0003s1955.1.p C. rubella v1.1 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
30170.m013676 R. communis v0.1 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
30099.m001700 R. communis v0.1 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
orange1.1g001687m C. sinensis v1.1 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
orange1.1g001878m C. sinensis v1.1 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
AT3G19670.1 A. thaliana TAIR10 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
AT1G44910.1 A. thaliana TAIR10 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
Thhalv10019995m E. salsugineum v1.0 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
Ciclev10027732m C. clementina v1.0 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
Ciclev10027741m C. clementina v1.0 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
Lus10033770 L. usitatissimum v1.0 124245383 pre-mRNA-processing protein 40B 4 5268 Malvidae
Lus10018659 L. usitatissimum v1.0 124245383 pre-mRNA-processing protein 40B 4 5268 Malvidae
Gorai.010G027200.1 G. raimondii v2.1 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
Thecc1EG034659t3 T. cacao v1.1 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
Thecc1EG007259t1 T. cacao v1.1 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae
Araha.3986s0001.1.p A. halleri v1.1 124245383 pre-mRNA-processing protein 40B 1 5268 Malvidae
Cagra.6943s0018.1.p C. grandiflora v1.1 124245383 pre-mRNA-processing protein 40B 2 5268 Malvidae