Gene : Bostr.12302s0099 B. stricta v1.2
Defline:  (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 Genomic Order:  99
Name:  ? Bostr.12302s0099 Secondary Identifier:  ? PAC:30664524
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12302s0099 0.5kb upstream 0.5kb upstream 9006 true Scaffold12302: 1539192-1548197 Boechera stricta
Bostr.12302s0099 0.5kb upstream 0.5kb upstream 500 false Scaffold12302: 1539192-1539691 Boechera stricta
Bostr.12302s0099 0.5kb downstream 0.5kb downstream 9006 true Scaffold12302: 1539692-1548697 Boechera stricta
Bostr.12302s0099 0.5kb downstream 0.5kb downstream 500 false Scaffold12302: 1548198-1548697 Boechera stricta
Bostr.12302s0099 1.0kb upstream 1.0kb upstream 9506 true Scaffold12302: 1538692-1548197 Boechera stricta
Bostr.12302s0099 1.0kb upstream 1.0kb upstream 1000 false Scaffold12302: 1538692-1539691 Boechera stricta
Bostr.12302s0099 1.0kb downstream 1.0kb downstream 9506 true Scaffold12302: 1539692-1549197 Boechera stricta
Bostr.12302s0099 1.0kb downstream 1.0kb downstream 1000 false Scaffold12302: 1548198-1549197 Boechera stricta
Bostr.12302s0099 2.0kb upstream 2.0kb upstream 10506 true Scaffold12302: 1537692-1548197 Boechera stricta
Bostr.12302s0099 2.0kb upstream 2.0kb upstream 2000 false Scaffold12302: 1537692-1539691 Boechera stricta
Bostr.12302s0099 2.0kb downstream 2.0kb downstream 10506 true Scaffold12302: 1539692-1550197 Boechera stricta
Bostr.12302s0099 2.0kb downstream 2.0kb downstream 2000 false Scaffold12302: 1548198-1550197 Boechera stricta
Bostr.12302s0099 5.0kb upstream 5.0kb upstream 13506 true Scaffold12302: 1534692-1548197 Boechera stricta
Bostr.12302s0099 5.0kb upstream 5.0kb upstream 5000 false Scaffold12302: 1534692-1539691 Boechera stricta
Bostr.12302s0099 5.0kb downstream 5.0kb downstream 13506 true Scaffold12302: 1539692-1553197 Boechera stricta
Bostr.12302s0099 5.0kb downstream 5.0kb downstream 5000 false Scaffold12302: 1548198-1553197 Boechera stricta
Bostr.12302s0099 10.0kb upstream 10.0kb upstream 18506 true Scaffold12302: 1529692-1548197 Boechera stricta
Bostr.12302s0099 10.0kb upstream 10.0kb upstream 10000 false Scaffold12302: 1529692-1539691 Boechera stricta
Bostr.12302s0099 10.0kb downstream 10.0kb downstream 18506 true Scaffold12302: 1539692-1558197 Boechera stricta
Bostr.12302s0099 10.0kb downstream 10.0kb downstream 10000 false Scaffold12302: 1548198-1558197 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369990 5261 Brassicaceae View MSA
123833261 5264 Brassicales-Malvales View MSA
124350804 5266 SBM View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain