Gene : Bostr.19424s0693 B. stricta v1.2
Defline:  (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 Genomic Order:  693
Name:  ? Bostr.19424s0693 Secondary Identifier:  ? PAC:30661116
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0693 0.5kb upstream 0.5kb upstream 10316 true Scaffold19424: 5350155-5360470 Boechera stricta
Bostr.19424s0693 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 5350155-5350654 Boechera stricta
Bostr.19424s0693 0.5kb downstream 0.5kb downstream 10316 true Scaffold19424: 5350655-5360970 Boechera stricta
Bostr.19424s0693 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 5360471-5360970 Boechera stricta
Bostr.19424s0693 1.0kb upstream 1.0kb upstream 10816 true Scaffold19424: 5349655-5360470 Boechera stricta
Bostr.19424s0693 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 5349655-5350654 Boechera stricta
Bostr.19424s0693 1.0kb downstream 1.0kb downstream 10816 true Scaffold19424: 5350655-5361470 Boechera stricta
Bostr.19424s0693 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 5360471-5361470 Boechera stricta
Bostr.19424s0693 2.0kb upstream 2.0kb upstream 11816 true Scaffold19424: 5348655-5360470 Boechera stricta
Bostr.19424s0693 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 5348655-5350654 Boechera stricta
Bostr.19424s0693 2.0kb downstream 2.0kb downstream 11816 true Scaffold19424: 5350655-5362470 Boechera stricta
Bostr.19424s0693 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 5360471-5362470 Boechera stricta
Bostr.19424s0693 5.0kb upstream 5.0kb upstream 14816 true Scaffold19424: 5345655-5360470 Boechera stricta
Bostr.19424s0693 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 5345655-5350654 Boechera stricta
Bostr.19424s0693 5.0kb downstream 5.0kb downstream 14816 true Scaffold19424: 5350655-5365470 Boechera stricta
Bostr.19424s0693 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 5360471-5365470 Boechera stricta
Bostr.19424s0693 10.0kb upstream 10.0kb upstream 19816 true Scaffold19424: 5340655-5360470 Boechera stricta
Bostr.19424s0693 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 5340655-5350654 Boechera stricta
Bostr.19424s0693 10.0kb downstream 10.0kb downstream 19816 true Scaffold19424: 5350655-5370470 Boechera stricta
Bostr.19424s0693 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 5360471-5370470 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360518 5261 Brassicaceae View MSA
123840209 5264 Brassicales-Malvales View MSA
124350804 5266 SBM View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain