Gene : Brara.E02240 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 Genomic Order:  2240
Name:  ? Brara.E02240 Secondary Identifier:  ? PAC:30623591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02240 0.5kb upstream 0.5kb upstream 8946 true A05: 20446960-20455905 Brassica rapa FPsc
Brara.E02240 0.5kb upstream 0.5kb upstream 500 false A05: 20455406-20455905 Brassica rapa FPsc
Brara.E02240 0.5kb downstream 0.5kb downstream 8946 true A05: 20446460-20455405 Brassica rapa FPsc
Brara.E02240 0.5kb downstream 0.5kb downstream 500 false A05: 20446460-20446959 Brassica rapa FPsc
Brara.E02240 1.0kb upstream 1.0kb upstream 9446 true A05: 20446960-20456405 Brassica rapa FPsc
Brara.E02240 1.0kb upstream 1.0kb upstream 1000 false A05: 20455406-20456405 Brassica rapa FPsc
Brara.E02240 1.0kb downstream 1.0kb downstream 9446 true A05: 20445960-20455405 Brassica rapa FPsc
Brara.E02240 1.0kb downstream 1.0kb downstream 1000 false A05: 20445960-20446959 Brassica rapa FPsc
Brara.E02240 2.0kb upstream 2.0kb upstream 10446 true A05: 20446960-20457405 Brassica rapa FPsc
Brara.E02240 2.0kb upstream 2.0kb upstream 2000 false A05: 20455406-20457405 Brassica rapa FPsc
Brara.E02240 2.0kb downstream 2.0kb downstream 10446 true A05: 20444960-20455405 Brassica rapa FPsc
Brara.E02240 2.0kb downstream 2.0kb downstream 2000 false A05: 20444960-20446959 Brassica rapa FPsc
Brara.E02240 5.0kb upstream 5.0kb upstream 13446 true A05: 20446960-20460405 Brassica rapa FPsc
Brara.E02240 5.0kb upstream 5.0kb upstream 5000 false A05: 20455406-20460405 Brassica rapa FPsc
Brara.E02240 5.0kb downstream 5.0kb downstream 13446 true A05: 20441960-20455405 Brassica rapa FPsc
Brara.E02240 5.0kb downstream 5.0kb downstream 5000 false A05: 20441960-20446959 Brassica rapa FPsc
Brara.E02240 10.0kb upstream 10.0kb upstream 18446 true A05: 20446960-20465405 Brassica rapa FPsc
Brara.E02240 10.0kb upstream 10.0kb upstream 10000 false A05: 20455406-20465405 Brassica rapa FPsc
Brara.E02240 10.0kb downstream 10.0kb downstream 18446 true A05: 20436960-20455405 Brassica rapa FPsc
Brara.E02240 10.0kb downstream 10.0kb downstream 10000 false A05: 20436960-20446959 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360518 5261 Brassicaceae View MSA
123840209 5264 Brassicales-Malvales View MSA
124350804 5266 SBM View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier