Gene : Brara.J00586 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 Genomic Order:  586
Name:  ? Brara.J00586 Secondary Identifier:  ? PAC:30613262
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00586 0.5kb upstream 0.5kb upstream 8013 true A10: 4349878-4357890 Brassica rapa FPsc
Brara.J00586 0.5kb upstream 0.5kb upstream 500 false A10: 4349878-4350377 Brassica rapa FPsc
Brara.J00586 0.5kb downstream 0.5kb downstream 8013 true A10: 4350378-4358390 Brassica rapa FPsc
Brara.J00586 0.5kb downstream 0.5kb downstream 500 false A10: 4357891-4358390 Brassica rapa FPsc
Brara.J00586 1.0kb upstream 1.0kb upstream 8513 true A10: 4349378-4357890 Brassica rapa FPsc
Brara.J00586 1.0kb upstream 1.0kb upstream 1000 false A10: 4349378-4350377 Brassica rapa FPsc
Brara.J00586 1.0kb downstream 1.0kb downstream 8513 true A10: 4350378-4358890 Brassica rapa FPsc
Brara.J00586 1.0kb downstream 1.0kb downstream 1000 false A10: 4357891-4358890 Brassica rapa FPsc
Brara.J00586 2.0kb upstream 2.0kb upstream 9513 true A10: 4348378-4357890 Brassica rapa FPsc
Brara.J00586 2.0kb upstream 2.0kb upstream 2000 false A10: 4348378-4350377 Brassica rapa FPsc
Brara.J00586 2.0kb downstream 2.0kb downstream 9513 true A10: 4350378-4359890 Brassica rapa FPsc
Brara.J00586 2.0kb downstream 2.0kb downstream 2000 false A10: 4357891-4359890 Brassica rapa FPsc
Brara.J00586 5.0kb upstream 5.0kb upstream 12513 true A10: 4345378-4357890 Brassica rapa FPsc
Brara.J00586 5.0kb upstream 5.0kb upstream 5000 false A10: 4345378-4350377 Brassica rapa FPsc
Brara.J00586 5.0kb downstream 5.0kb downstream 12513 true A10: 4350378-4362890 Brassica rapa FPsc
Brara.J00586 5.0kb downstream 5.0kb downstream 5000 false A10: 4357891-4362890 Brassica rapa FPsc
Brara.J00586 10.0kb upstream 10.0kb upstream 17513 true A10: 4340378-4357890 Brassica rapa FPsc
Brara.J00586 10.0kb upstream 10.0kb upstream 10000 false A10: 4340378-4350377 Brassica rapa FPsc
Brara.J00586 10.0kb downstream 10.0kb downstream 17513 true A10: 4350378-4367890 Brassica rapa FPsc
Brara.J00586 10.0kb downstream 10.0kb downstream 10000 false A10: 4357891-4367890 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369990 5261 Brassicaceae View MSA
123833261 5264 Brassicales-Malvales View MSA
124350804 5266 SBM View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier