Gene : orange1.1g001878m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 Genomic Order:  21
Name:  ? orange1.1g001878m.g Secondary Identifier:  ? PAC:18129156
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g001878m.g 0.5kb upstream 0.5kb upstream 11165 true scaffold00236: 126225-137389 Citrus sinensis
orange1.1g001878m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00236: 126225-126724 Citrus sinensis
orange1.1g001878m.g 0.5kb downstream 0.5kb downstream 11165 true scaffold00236: 126725-137889 Citrus sinensis
orange1.1g001878m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00236: 137390-137889 Citrus sinensis
orange1.1g001878m.g 1.0kb upstream 1.0kb upstream 11665 true scaffold00236: 125725-137389 Citrus sinensis
orange1.1g001878m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00236: 125725-126724 Citrus sinensis
orange1.1g001878m.g 1.0kb downstream 1.0kb downstream 11665 true scaffold00236: 126725-138389 Citrus sinensis
orange1.1g001878m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00236: 137390-138389 Citrus sinensis
orange1.1g001878m.g 2.0kb upstream 2.0kb upstream 12665 true scaffold00236: 124725-137389 Citrus sinensis
orange1.1g001878m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00236: 124725-126724 Citrus sinensis
orange1.1g001878m.g 2.0kb downstream 2.0kb downstream 12665 true scaffold00236: 126725-139389 Citrus sinensis
orange1.1g001878m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00236: 137390-139389 Citrus sinensis
orange1.1g001878m.g 5.0kb upstream 5.0kb upstream 15665 true scaffold00236: 121725-137389 Citrus sinensis
orange1.1g001878m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00236: 121725-126724 Citrus sinensis
orange1.1g001878m.g 5.0kb downstream 5.0kb downstream 15665 true scaffold00236: 126725-142389 Citrus sinensis
orange1.1g001878m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00236: 137390-142389 Citrus sinensis
orange1.1g001878m.g 10.0kb upstream 10.0kb upstream 20665 true scaffold00236: 116725-137389 Citrus sinensis
orange1.1g001878m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00236: 116725-126724 Citrus sinensis
orange1.1g001878m.g 10.0kb downstream 10.0kb downstream 20665 true scaffold00236: 126725-147389 Citrus sinensis
orange1.1g001878m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00236: 137390-147389 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350804 5266 SBM View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain