Gene : Thhalv10019995m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11864 - PRE-MRNA-PROCESSING PROTEIN PRP40 Genomic Order:  436
Name:  ? Thhalv10019995m.g Secondary Identifier:  ? PAC:20181783
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10019995m.g 0.5kb upstream 0.5kb upstream 8908 true scaffold_13: 2388897-2397804 Eutrema salsugineum
Thhalv10019995m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 2388897-2389396 Eutrema salsugineum
Thhalv10019995m.g 0.5kb downstream 0.5kb downstream 8908 true scaffold_13: 2389397-2398304 Eutrema salsugineum
Thhalv10019995m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 2397805-2398304 Eutrema salsugineum
Thhalv10019995m.g 1.0kb upstream 1.0kb upstream 9408 true scaffold_13: 2388397-2397804 Eutrema salsugineum
Thhalv10019995m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 2388397-2389396 Eutrema salsugineum
Thhalv10019995m.g 1.0kb downstream 1.0kb downstream 9408 true scaffold_13: 2389397-2398804 Eutrema salsugineum
Thhalv10019995m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 2397805-2398804 Eutrema salsugineum
Thhalv10019995m.g 2.0kb upstream 2.0kb upstream 10408 true scaffold_13: 2387397-2397804 Eutrema salsugineum
Thhalv10019995m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 2387397-2389396 Eutrema salsugineum
Thhalv10019995m.g 2.0kb downstream 2.0kb downstream 10408 true scaffold_13: 2389397-2399804 Eutrema salsugineum
Thhalv10019995m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 2397805-2399804 Eutrema salsugineum
Thhalv10019995m.g 5.0kb upstream 5.0kb upstream 13408 true scaffold_13: 2384397-2397804 Eutrema salsugineum
Thhalv10019995m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 2384397-2389396 Eutrema salsugineum
Thhalv10019995m.g 5.0kb downstream 5.0kb downstream 13408 true scaffold_13: 2389397-2402804 Eutrema salsugineum
Thhalv10019995m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 2397805-2402804 Eutrema salsugineum
Thhalv10019995m.g 10.0kb upstream 10.0kb upstream 18408 true scaffold_13: 2379397-2397804 Eutrema salsugineum
Thhalv10019995m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 2379397-2389396 Eutrema salsugineum
Thhalv10019995m.g 10.0kb downstream 10.0kb downstream 18408 true scaffold_13: 2389397-2407804 Eutrema salsugineum
Thhalv10019995m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 2397805-2407804 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360518 5261 Brassicaceae View MSA
123840209 5264 Brassicales-Malvales View MSA
124350804 5266 SBM View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain